Evidence map›Paper›PMID 37780641›Full record

ArticleFrontiers in radiology2023

AI in the Loop: functionalizing fold performance disagreement to monitor automated medical image segmentation workflows.

Harrison C Gottlich, Panagiotis Korfiatis, Adriana V Gregory, Timothy L Kline

Abstract read
In one paragraph

Article in Frontiers in radiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Harrison C Gottlich *Mayo Clinic Alix School of Medicine, Mayo Clinic, Rochester, MN, United States.
Panagiotis Korfiatis *Department of Radiology, Mayo Clinic, Rochester, MN, United States.
Adriana V GregoryDepartment of Radiology, Mayo Clinic, Rochester, MN, United States.
Timothy L KlineDepartment of Radiology, Mayo Clinic, Rochester, MN, United States.

Funding

Advanced MR Imaging and Image Analytics as a Precision Medicine Tool to Manage ADPKDK01DK110136 · NIDDK · MAYO CLINIC ROCHESTER · PI KLINE, TIMOTHY LEE · 2017 to 2021
$732k
Artificial Intelligence-Based Approaches for Renal Structure Characterization in Computed Tomography ImagesR03DK125632 · NIDDK · MAYO CLINIC ROCHESTER · PI KLINE, TIMOTHY LEE · 2020 to 2021
$233k
NIDDK NIH HHS K01 DK110136NIDDK NIH HHS R03 DK125632
6 · The paper itself

Abstract

Introduction: Methods that automatically flag poor performing predictions are drastically needed to safely implement machine learning workflows into clinical practice as well as to identify difficult cases during model training. Methods: Disagreement between the fivefold cross-validation sub-models was quantified using dice scores between folds and summarized as a surrogate for model confidence. The summarized Interfold Dices were compared with thresholds informed by human interobserver values to determine whether final ensemble model performance should be manually reviewed. Results: The method on all tasks efficiently flagged poor segmented images without consulting a reference standard. Using the median Interfold Dice for comparison, substantial dice score improvements after excluding flagged images was noted for the in-domain CT (0.85 ± 0.20 to 0.91 ± 0.08, 8/50 images flagged) and MR (0.76 ± 0.27 to 0.85 ± 0.09, 8/50 images flagged). Most impressively, there were dramatic dice score improvements in the simulated out-of-distribution task where the model was trained on a radical nephrectomy dataset with different contrast phases predicting a partial nephrectomy all cortico-medullary phase dataset (0.67 ± 0.36 to 0.89 ± 0.10, 122/300 images flagged). Discussion: Comparing interfold sub-model disagreement against human interobserver values is an effective and efficient way to assess automated predictions when a reference standard is not available. This functionality provides a necessary safeguard to patient care important to safely implement automated medical image segmentation workflows.

Indexed as

AI in the loopconvolutional neural networksdeep learningepistemic uncertaintymachine learning model performancesemantic segmentationsimilarity metrics

Identifiers

PMID37780641
PMCPMC10540615

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.