Evidence map›Paper›PMID 37773581›Full record

ArticleApplied biochemistry and biotechnology2024

Electrochemical DNA Sensor Designed Using the Pencil Graphite Electrode to Detect Listeria monocytogenes.

Emine Dinçer, Nurçin Küçükoğlu, Merih Kıvanç, Yücel Şahin

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In one paragraph

Article in Applied biochemistry and biotechnology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.5field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 3 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Emine DinçerDepartment of Nutrition and Dietetics, Faculty of Health Science, Sivas Cumhuriyet University, Sivas, Turkey. eminedincer26@gmail.com.ORCID http://orcid.org/0000-0002-6361-4419
Nurçin KüçükoğluDepartment of Biology, Faculty of Sciences, Eskisehir Teknik University, Eskisehir, Turkey.
Merih KıvançDepartment of Biology, Faculty of Sciences, Eskisehir Teknik University, Eskisehir, Turkey.
Yücel ŞahinDepartment of Chemistry, Faculty of Art and Sciences, Yildiz Technical University, Istanbul, Turkey.
Eskisehir Technical University · TRSivas Cumhuriyet Üniversitesi · TRYıldız Technical University · TR

Funding

Anadolu University Scientific Research Projects Commission 1102F030
6 · The paper itself

Abstract

In the present work, a novel electrochemical DNA sensor was designed to detect L. monocytogenes. Two different gene fragments were selected for the sensor design. One is a 702 bp long fragment of the hlyA gene, encoding the synthesis of listeriolysin O toxin, which is unique only to pathogenic strains of L. monocytogenes and is essential for pathogenicity. The other is a 209 bp long fragment of the 16 S RNA gene found in all species of the Listeria genus. As the working electrode, the pencil graphite electrode was modified in various ways (activated or covered with polypyrrole), and six different combinations were constituted using three types of the modified working electrode and two different gene fragments. The developed system is based on differential pulse voltammetric transduction of guanine oxidation after hybridization between the selected gene fragment (38 µg/mL) and the selected fragment-specific inosine-modified probe (1.8 µmol/L) immobilized on a pencil graphite electrode surface. The comparison of all combinations demonstrates that the best results are obtained with the combination formed from a polypyrrole-coated pencil graphite electrode (prepared at 2 scans) and 702 bp fragment of the hlyA gene. The analysis time is less than 1 hour, and the necessary DNA concentrations for the analysis have been determined as 8.2 × 10

Indexed as

Biosensing TechniquesElectrodesGraphiteHemolysin ProteinsListeria monocytogenesBacterial ToxinsDNA, BacterialElectrochemical TechniquesHeat-Shock ProteinsPolymersPyrrolesBacterial ToxinsDNA, BacterialGraphiteHeat-Shock ProteinsHemolysin ProteinshlyA protein, Listeria monocytogenesPolymerspolypyrrolePyrrolesDNA hybridizationGenosensorsListeriolysin O toxinPencil graphite electrodePolypyrrole

Identifiers

PMID37773581
OpenAlexW4387185791

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.