Evidence map›Paper›PMID 37773136›Full record

ArticleGenome biology2023

A loss-of-function mutation in human Oxidation Resistance 1 disrupts the spatial-temporal regulation of histone arginine methylation in neurodevelopment.

Xiaolin Lin, Wei Wang, Mingyi Yang, Nadirah Damseh, Mirta Mittelstedt Leal de Sousa, Fadi Jacob, Anna Lång, Elise Kristiansen, Marco Pannone, Miroslava Kissova and 19 more

Open access · goldAbstract read
In one paragraph

Article in Genome biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 11 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 5 institutions in 5 countries.

Xiaolin LinDepartment of Microbiology, Oslo University Hospital and University of Oslo, Oslo, Norway.
Wei WangDepartment of Clinical and Molecular Medicine (IKOM), Norwegian University of Science and Technology (NTNU), 7491, Trondheim, Norway.
Mingyi YangDepartment of Microbiology, Oslo University Hospital and University of Oslo, Oslo, Norway.
Nadirah DamsehDepartment of Pediatrics, Makassed Hospital and Al-Quds University, East Jerusalem, Palestine.
Mirta Mittelstedt Leal de SousaDepartment of Clinical and Molecular Medicine (IKOM), Norwegian University of Science and Technology (NTNU), 7491, Trondheim, Norway.
Fadi JacobDepartment of Neuroscience and Mahoney Institute for Neurosciences, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Anna LångDepartment of Microbiology, Oslo University Hospital and University of Oslo, Oslo, Norway.
Elise KristiansenDepartment of Microbiology, Oslo University Hospital and University of Oslo, Oslo, Norway.
Marco PannoneDepartment of Clinical and Molecular Medicine (IKOM), Norwegian University of Science and Technology (NTNU), 7491, Trondheim, Norway.
Miroslava KissovaDepartment of Clinical and Molecular Medicine (IKOM), Norwegian University of Science and Technology (NTNU), 7491, Trondheim, Norway.
Runar AlmaasDepartment of Pediatric Research, Oslo University Hospital and University of Oslo, Oslo, Norway.
Anna KuśnierczykDepartment of Microbiology, Oslo University Hospital and University of Oslo, Oslo, Norway.
Richard SillerNorwegian Centre for Stem Cell Research, Oslo University Hospital and University of Oslo, Oslo, Norway.
Maher ShahrourDepartment of Pediatrics, Makassed Hospital and Al-Quds University, East Jerusalem, Palestine.
Motee Al-AshhabDepartment of Pediatrics, Makassed Hospital and Al-Quds University, East Jerusalem, Palestine.
Bassam Abu-LibdehDepartment of Pediatrics, Makassed Hospital and Al-Quds University, East Jerusalem, Palestine.
Wannan TangDepartment of Clinical and Molecular Medicine (IKOM), Norwegian University of Science and Technology (NTNU), 7491, Trondheim, Norway.
Geir SlupphaugDepartment of Microbiology, Oslo University Hospital and University of Oslo, Oslo, Norway.
Orly ElpelegDepartment of Genetics, Hadassah University Hospital, Jerusalem, Israel.
Stig Ove BøeDepartment of Microbiology, Oslo University Hospital and University of Oslo, Oslo, Norway.
Lars EideDepartment of Biochemistry, Oslo University Hospital and University of Oslo, Oslo, Norway.
Gareth J SullivanNorwegian Centre for Stem Cell Research, Oslo University Hospital and University of Oslo, Oslo, Norway.
Johanne Egge RinholmDepartment of Microbiology, Oslo University Hospital and University of Oslo, Oslo, Norway.
Hongjun SongDepartment of Neuroscience and Mahoney Institute for Neurosciences, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Guo-Li MingDepartment of Neuroscience and Mahoney Institute for Neurosciences, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Barbara van LoonDepartment of Clinical and Molecular Medicine (IKOM), Norwegian University of Science and Technology (NTNU), 7491, Trondheim, Norway.
Simon EdvardsonDepartment of Genetics, Hadassah University Hospital, Jerusalem, Israel. SIMON@hadassah.org.il.
Jing YeDepartment of Clinical and Molecular Medicine (IKOM), Norwegian University of Science and Technology (NTNU), 7491, Trondheim, Norway. jing.ye@ntnu.no.
Magnar BjøråsDepartment of Microbiology, Oslo University Hospital and University of Oslo, Oslo, Norway. Magnar.Bjoras@ntnu.no.ORCID http://orcid.org/0000-0001-8759-1170
Oslo University Hospital · NONorwegian University of Science and Technology · NOAl-Quds University · PSUniversity of Pennsylvania · USHadassah Academic College · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundOxidation Resistance 1 (OXR1) gene is a highly conserved gene of the TLDc domain-containing family. OXR1 is involved in fundamental biological and cellular processes, including DNA damage response, antioxidant pathways, cell cycle, neuronal protection, and arginine methylation. In 2019, five patients from three families carrying four biallelic loss-of-function variants in OXR1 were reported to be associated with cerebellar atrophy. However, the impact of OXR1 on cellular functions and molecular mechanisms in the human brain is largely unknown. Notably, no human disease models are available to explore the pathological impact of OXR1 deficiency.

resultsWe report a novel loss-of-function mutation in the TLDc domain of the human OXR1 gene, resulting in early-onset epilepsy, developmental delay, cognitive disabilities, and cerebellar atrophy. Patient lymphoblasts show impaired cell survival, proliferation, and hypersensitivity to oxidative stress. These phenotypes are rescued by TLDc domain replacement. We generate patient-derived induced pluripotent stem cells (iPSCs) revealing impaired neural differentiation along with dysregulation of genes essential for neurodevelopment. We identify that OXR1 influences histone arginine methylation by activating protein arginine methyltransferases (PRMTs), suggesting OXR1-dependent mechanisms regulating gene expression during neurodevelopment. We model the function of OXR1 in early human brain development using patient-derived brain organoids revealing that OXR1 contributes to the spatial-temporal regulation of histone arginine methylation in specific brain regions.

conclusionsThis study provides new insights into pathological features and molecular underpinnings associated with OXR1 deficiency in patients.

Indexed as

CerebellumHistonesMitochondrial ProteinsNeurodegenerative DiseasesArginineAtrophyHumansMethylationMutationProtein-Arginine N-MethyltransferasesArginineHistonesMitochondrial ProteinsOXR1 protein, humanProtein-Arginine N-MethyltransferasesBrain organoidsHistone arginine methylationInduced pluripotent stem cells (iPSCs)Neurodevelopmental disorderOxidation Resistance 1 (OXR1)Protein arginine methyltransferases (PRMTs)

Identifiers

PMID37773136
PMCPMC10540402
OpenAlexW4387171989

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.