Evidence map›Paper›PMID 37773045›Full record

ArticleThe Journal of experimental medicine2023

TLR9 ligand sequestration by chemokine CXCL4 negatively affects central B cell tolerance.

Elif Çakan, Marie Dominique Ah Kioon, Yolanda Garcia-Carmona, Salomé Glauzy, David Oliver, Natsuko Yamakawa, Andrea Vega Loza, Yong Du, Jean-Nicolas Schickel, Joshua M Boeckers and 18 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Review
  7. The Role of CXCL4 in Systemic Sclerosis: DAMP, Auto-Antigen and Biomarker.International journal of molecular sciences · 2025
    Review
  8. Review
  9. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

28 authors at 9 institutions in 4 countries.

Elif Çakan *Department of Immunobiology, Yale University School of Medicine, New Haven, CT, USA.ORCID 0000-0002-5606-2070
Marie Dominique Ah Kioon *HSS Research Institute and David Z. Rosensweig Genomics Research Center, Hospital for Special Surgery , New York, NY, USA.ORCID 0000-0003-2319-0444
Yolanda Garcia-CarmonaDepartment of Clinical Immunology, Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID 0000-0003-2562-4752
Salomé GlauzyDepartment of Immunobiology, Yale University School of Medicine, New Haven, CT, USA.ORCID 0009-0001-7508-9287
David OliverHSS Research Institute and David Z. Rosensweig Genomics Research Center, Hospital for Special Surgery , New York, NY, USA.ORCID 0000-0002-2034-0921
Natsuko YamakawaDepartment of Immunobiology, Yale University School of Medicine, New Haven, CT, USA.ORCID 0000-0001-8388-9527
Andrea Vega LozaDepartment of Immunobiology, Yale University School of Medicine, New Haven, CT, USA.
Yong DuHSS Research Institute and David Z. Rosensweig Genomics Research Center, Hospital for Special Surgery , New York, NY, USA.ORCID 0000-0003-2986-6249
Jean-Nicolas SchickelDepartment of Immunobiology, Yale University School of Medicine, New Haven, CT, USA.ORCID 0009-0002-0592-8150
Joshua M BoeckersDepartment of Immunobiology, Yale University School of Medicine, New Haven, CT, USA.ORCID 0000-0002-3314-4743
Chao YangHSS Research Institute and David Z. Rosensweig Genomics Research Center, Hospital for Special Surgery , New York, NY, USA.ORCID 0000-0002-8661-3275
Alessia BaldoDepartment of Immunobiology, Yale University School of Medicine, New Haven, CT, USA.ORCID 0000-0002-8072-744X
Lionel B IvashkivHSS Research Institute and David Z. Rosensweig Genomics Research Center, Hospital for Special Surgery , New York, NY, USA.ORCID 0000-0002-9951-0646
Ryan M YoungLymphoid Malignancies Branch, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.ORCID 0000-0003-0706-8019
Louis M StaudtLymphoid Malignancies Branch, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.ORCID 0000-0002-1735-2892
Krishna L MoodyDepartment of Medicine, University of Massachusetts School of Medicine, Worcester, MA, USA.
Kerstin NündelDepartment of Medicine, University of Massachusetts School of Medicine, Worcester, MA, USA.ORCID 0000-0003-4329-9607
Ann Marshak-RothsteinDepartment of Medicine, University of Massachusetts School of Medicine, Worcester, MA, USA.ORCID 0000-0003-2136-8130
Caspar I van der MadeDepartment of Human Genetics, Radboud University Medical Center, Nijmegen, The Netherlands.ORCID 0000-0003-0763-4017
Alexander HoischenDepartment of Human Genetics, Radboud University Medical Center, Nijmegen, The Netherlands.ORCID 0000-0002-8072-4476
Anthony HaywardWarren Alper School of Medicine, Brown University , Providence, RI, USA.ORCID 0000-0003-3123-2894
Marzia RossatoDepartment of Biotechnology, University of Verona, Verona, Italy.ORCID 0000-0002-6101-1550
Timothy R D J RadstakeLaboratory of Translational Immunology, University Medical Center Utrecht, Utrecht University, Utrecht, The Netherlands.ORCID 0000-0003-1241-6911
Charlotte Cunningham-RundlesDepartment of Clinical Immunology, Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID 0000-0003-0725-0320
Changwan RyuDepartment of Internal Medicine, Section of Pulmonary, Critical Care and Sleep Medicine, Yale School of Medicine, New Haven, CT, USA.ORCID 0000-0001-6211-4327
Erica L HerzogDepartment of Internal Medicine, Section of Pulmonary, Critical Care and Sleep Medicine, Yale School of Medicine, New Haven, CT, USA.ORCID 0000-0002-7508-8575
Franck J Barrat *HSS Research Institute and David Z. Rosensweig Genomics Research Center, Hospital for Special Surgery , New York, NY, USA.ORCID 0000-0002-0735-0850
Eric Meffre *Department of Immunobiology, Yale University School of Medicine, New Haven, CT, USA.ORCID 0000-0003-4326-0171
Yale University · USHospital for Special Surgery · USUniversity of Massachusetts Chan Medical School · USIcahn School of Medicine at Mount Sinai · USNational Institutes of Health · USRadboud University Nijmegen · NLBrown University · USUniversity of Verona · ITUtrecht University · NL

Funding

Regulation of IgA class switching in the intestinal mucosaP01AI061093 · NIAID · MOUNT SINAI SCHOOL OF MEDICINE OF NYU · PI CASANOVA, JEAN-LAURENT · 2004 to 2021
$29.8M
Fc Receptors &Cytokine Balance in Rheumatoid ArthritisR01AR050401 · NIAMS · HOSPITAL FOR SPECIAL SURGERY · PI Lionel B Ivashkiv · 2004 to 2026
$7.4M
Loss of B Cell Tolerance in Rheumatoid ArthritisR01AI071087 · NIAID · YALE UNIVERSITY · PI MEFFRE, ERIC · 2006 to 2016
$4.3M
Role of plasmacytoid dendritic cells in autoimmunityR01AI132447 · NIAID · HOSPITAL FOR SPECIAL SURGERY · PI BARRAT, FRANCK · 2018 to 2022
$2.2M
Mitochondrial DNA and TLR9 in Pulmonary FibrosisK08HL151970 · NHLBI · YALE UNIVERSITY · PI RYU, CHANGWAN · 2020 to 2024
$840k
NHLBI NIH HHS K08 HL151970NIAID NIH HHS P01 AI061093NIAID NIH HHS R01 AI071087NIAID NIH HHS R01 AI132447NIAMS NIH HHS R01 AR050401
6 · The paper itself

Abstract

Central B cell tolerance is believed to be regulated by B cell receptor signaling induced by the recognition of self-antigens in immature B cells. Using humanized mice with defective MyD88, TLR7, or TLR9 expression, we demonstrate that TLR9/MYD88 are required for central B cell tolerance and the removal of developing autoreactive clones. We also show that CXCL4, a chemokine involved in systemic sclerosis (SSc), abrogates TLR9 function in B cells by sequestering TLR9 ligands away from the endosomal compartments where this receptor resides. The in vivo production of CXCL4 thereby impedes both TLR9 responses in B cells and the establishment of central B cell tolerance. We conclude that TLR9 plays an essential early tolerogenic function required for the establishment of central B cell tolerance and that correcting defective TLR9 function in B cells from SSc patients may represent a novel therapeutic strategy to restore B cell tolerance.

Indexed as

Platelet Factor 4Scleroderma, SystemicToll-Like Receptor 9AnimalsB-LymphocytesHumansLigandsMiceMyeloid Differentiation Factor 88Toll-Like Receptor 7LigandsMyeloid Differentiation Factor 88Platelet Factor 4Tlr9 protein, mouseToll-Like Receptor 7Toll-Like Receptor 9

Identifiers

PMID37773045
PMCPMC10541333
OpenAlexW4387157917

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.