Evidence map›Paper›PMID 37772853›Full record

ArticleMicrobiology spectrum2023

The diagnostic utility of microscopic quality assessment of sputum samples in the era of rapid syndromic PCR testing.

Dagfinn Lunde Markussen, Marit Ebbesen, Sondre Serigstad, Siri Tandberg Knoop, Christian Ritz, Rune Bjørneklett, Øyvind Kommedal, Synne Jenum, Elling Ulvestad, Harleen M S Grewal

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Review
  3. Impact of the microscopic quality of endotracheal aspirates on the performance of the Filmarray® pneumonia plus panel in intensive care unit patients with suspected lower respiratory tract infection.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2025
    Article
  4. Article
  5. Review
  6. Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Dagfinn Lunde MarkussenEmergency Care Clinic, Haukeland University Hospital , Bergen, Norway.ORCID 0000-0003-3504-8859
Marit EbbesenDepartment of Microbiology, Haukeland University Hospital , Bergen, Norway.
Sondre SerigstadEmergency Care Clinic, Haukeland University Hospital , Bergen, Norway.
Siri Tandberg KnoopDepartment of Microbiology, Haukeland University Hospital , Bergen, Norway.
Christian RitzDepartment of Clinical Science, Bergen Integrated Diagnostic Stewardship Cluster, Faculty of Medicine, University of Bergen , Bergen, Norway.
Rune BjørneklettEmergency Care Clinic, Haukeland University Hospital , Bergen, Norway.
Øyvind KommedalDepartment of Clinical Science, Bergen Integrated Diagnostic Stewardship Cluster, Faculty of Medicine, University of Bergen , Bergen, Norway.
Synne JenumDepartment of Clinical Science, Bergen Integrated Diagnostic Stewardship Cluster, Faculty of Medicine, University of Bergen , Bergen, Norway.
Elling UlvestadDepartment of Clinical Science, Bergen Integrated Diagnostic Stewardship Cluster, Faculty of Medicine, University of Bergen , Bergen, Norway.
Harleen M S GrewalDepartment of Clinical Science, Bergen Integrated Diagnostic Stewardship Cluster, Faculty of Medicine, University of Bergen , Bergen, Norway.ORCID 0000-0002-3380-1117
Haukeland University Hospital · NOOslo University Hospital · NOUniversity of Southern Denmark · DK

Funding

Haukeland Universitetssjukehus (Haukeland University Hospital)Norges Forskningsråd (Forskningsrådet) NORCAP 288718Trond Mohn stiftelse (Trond Mohn Foundation) TMS2020TMT07 BFS2019TMT06Universitetet i Bergen (UiB)
6 · The paper itself

Abstract

importanceMicroscopic quality assessment of sputum samples was originally designed for sputum culture, and its applicability in today's workflow, which includes syndromic PCR testing, may differ. Addressing this crucial gap, our study emphasizes the need to optimize the use and workflow of syndromic PCR panels, like the BioFire FilmArray Pneumonia plus (FAP plus), in microbiology laboratories. These advanced PCR-based tests offer rapid and comprehensive pathogen detection for respiratory infections, yet their full potential remains uncertain. By comparing bacterial detections in high- and low-quality sputum samples, we underscore the importance of including low-quality samples in testing. Our findings reveal a significant proportion of potentially clinically relevant bacterial detections that would have been missed if only high-quality samples were analyzed. These insights support the efficient implementation of syndromic PCR panels, ultimately enhancing patient care and outcomes.

Indexed as

diagnosticsfilmarraygram stainmicrocopymolecular methodspneumoniaquality assurancerapid testssputumsyndromic PCR

Identifiers

PMID37772853
PMCPMC10581175
OpenAlexW4387158069

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.