Evidence map›Paper›PMID 37770430›Full record

ArticleNature communications2023

Acetylation reprograms MITF target selectivity and residence time.

Pakavarin Louphrasitthiphol, Alessia Loffreda, Vivian Pogenberg, Sarah Picaud, Alexander Schepsky, Hans Friedrichsen, Zhiqiang Zeng, Anahita Lashgari, Benjamin Thomas, E Elizabeth Patton and 6 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 8 institutions in 6 countries.

Pakavarin LouphrasitthipholLudwig Institute for Cancer Research, Nuffield Department of Clinical Medicine, University of Oxford, Headington, Oxford, UK.ORCID http://orcid.org/0000-0001-6546-332X
Alessia LoffredaExperimental Imaging Center, Ospedale San Raffaele, Milano, Italy.ORCID http://orcid.org/0000-0003-4523-5666
Vivian PogenbergEuropean Molecular Biology Laboratory, Hamburg Unit, Hamburg, Germany.ORCID http://orcid.org/0000-0002-1021-6804
Sarah PicaudStructural Genomics Consortium, Nuffield Department of Clinical Medicine, University of Oxford, Headington, Oxford, UK.
Alexander SchepskyLudwig Institute for Cancer Research, Nuffield Department of Clinical Medicine, University of Oxford, Headington, Oxford, UK.
Hans FriedrichsenLudwig Institute for Cancer Research, Nuffield Department of Clinical Medicine, University of Oxford, Headington, Oxford, UK.
Zhiqiang ZengMRC Institute of Genetics and Molecular Medicine, MRC Human Genetics Unit & Edinburgh Cancer Research Centre, Edinburgh, UK.
Anahita LashgariDepartment of Molecular Medicine and Cancer Research Center, Université Laval, Quebec, Canada; Endocrinology - Nephrology Axis, CHU de Québec - Université Laval Research Center, Quebec City, QC, Canada.
Benjamin ThomasCentral Proteomics Facility, Sir William Dunn Pathology School, University of Oxford, Oxford, UK.
E Elizabeth PattonMRC Institute of Genetics and Molecular Medicine, MRC Human Genetics Unit & Edinburgh Cancer Research Centre, Edinburgh, UK.ORCID http://orcid.org/0000-0002-2570-0834
Matthias WilmannsEuropean Molecular Biology Laboratory, Hamburg Unit, Hamburg, Germany.ORCID http://orcid.org/0000-0002-4643-5435
Panagis FilippakopoulosStructural Genomics Consortium, Nuffield Department of Clinical Medicine, University of Oxford, Headington, Oxford, UK.
Jean-Philippe LambertDepartment of Molecular Medicine and Cancer Research Center, Université Laval, Quebec, Canada; Endocrinology - Nephrology Axis, CHU de Québec - Université Laval Research Center, Quebec City, QC, Canada.ORCID http://orcid.org/0000-0002-0833-1221
Eiríkur SteingrímssonDepartment of Biochemistry and Molecular Biology, BioMedical Center, Faculty of Medicine, University of Iceland, Reykjavik, Iceland.
Davide MazzaExperimental Imaging Center, Ospedale San Raffaele, Milano, Italy.ORCID http://orcid.org/0000-0003-2776-4142
Colin R GodingLudwig Institute for Cancer Research, Nuffield Department of Clinical Medicine, University of Oxford, Headington, Oxford, UK. colin.goding@ludwig.ox.ac.uk.ORCID http://orcid.org/0000-0002-1614-3909
University of Oxford · GBInstitute of Genetics and Cancer · GBUniversität Hamburg · DEUniversité Laval · CAUniversity of Iceland · ISIRCCS Ospedale San Raffaele · ITUniversity of Tsukuba · JPVita-Salute San Raffaele University · IT

Funding

The integrated stress response and the microenvironment in melanoma progressionR01CA268597 · NCI · UNIVERSITY OF PENNSYLVANIA · PI Colin Goding, Constantinos Koumenis · 2022 to 2026
$2.0M
Cancer Research UK C38302/A12981Medical Research Council MC_UU_00007/9Medical Research Council MC_UU_00035/13Medical Research Council MR/N010051/1NCI NIH HHS R01 CA268597
6 · The paper itself

Abstract

The ability of transcription factors to discriminate between different classes of binding sites associated with specific biological functions underpins effective gene regulation in development and homeostasis. How this is achieved is poorly understood. The microphthalmia-associated transcription factor MITF is a lineage-survival oncogene that plays a crucial role in melanocyte development and melanoma. MITF suppresses invasion, reprograms metabolism and promotes both proliferation and differentiation. How MITF distinguishes between differentiation and proliferation-associated targets is unknown. Here we show that compared to many transcription factors MITF exhibits a very long residence time which is reduced by p300/CBP-mediated MITF acetylation at K206. While K206 acetylation also decreases genome-wide MITF DNA-binding affinity, it preferentially directs DNA binding away from differentiation-associated CATGTG motifs toward CACGTG elements. The results reveal an acetylation-mediated switch that suppresses differentiation and provides a mechanistic explanation of why a human K206Q MITF mutation is associated with Waardenburg syndrome.

Indexed as

MelanomaMicrophthalmia-Associated Transcription FactorAcetylationCell Line, TumorHumansMelanocytesMicrophthalmia-Associated Transcription FactorMITF protein, human

Identifiers

PMID37770430
PMCPMC10539308
OpenAlexW4387134972

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.