Evidence map›Paper›PMID 37766427›Full record

ArticleBiophysical journal2023

Modeling and analysis of voltage gating of gap junction channels at a single-channel level.

Mindaugas Snipas, Lukas Gudaitis, Lina Kraujaliene, Tadas Kraujalis, Vytas K Verselis

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Mindaugas SnipasInstitute of Cardiology, Lithuanian University of Health Sciences, Kaunas, Lithuania; Department of Mathematical Modelling, Kaunas University of Technology, Kaunas, Lithuania. Electronic address: mindaugas.snipas@ktu.lt.
Lukas GudaitisInstitute of Cardiology, Lithuanian University of Health Sciences, Kaunas, Lithuania.
Lina KraujalieneInstitute of Cardiology, Lithuanian University of Health Sciences, Kaunas, Lithuania.
Tadas KraujalisInstitute of Cardiology, Lithuanian University of Health Sciences, Kaunas, Lithuania; Department of Applied Informatics, Kaunas University of Technology, Kaunas, Lithuania.
Vytas K VerselisDominick P. Purpura Department of Neuroscience, Albert Einstein College of Medicine, New York, New York.
Lithuanian University of Health Sciences · LTAlbert Einstein College of Medicine · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The advancement of single-channel-level recording via the patch-clamp technique has provided a powerful means of assessing the detailed behaviors of various types of ion channels in native and exogenously expressed cellular environments. However, such recordings of gap junction (GJ) channels are hampered by unique challenges that are related to their unusual intercellular configuration and natural clustering into densely packed plaques. Thus, the methods for reliable cross-correlation of data recorded at macroscopic and single-channel levels are lacking in studies of GJs. To address this issue, we combined our previously published four-state model (4SM) of GJ channel gating by voltage with maximum likelihood estimation (MLE)-based analyses of electrophysiological recordings of GJ channel currents. First, we consider evaluation of single-channel characteristics and the methods for efficient stochastic simulation of single GJ channels from the kinetic scheme described by 4SM using data obtained from macroscopic recordings. We then present an MLE-based methodology for extraction of information about transition rates for GJ channels and, ultimately, gating parameters defined in 4SM from recordings with visible unitary events. The validity of the proposed methodology is illustrated using stochastic simulations of single GJ channels and is extended to electrophysiological data recorded in cells expressing connexin 43 tagged with enhanced green fluorescent protein.

Indexed as

ConnexinsIon Channel GatingGap JunctionsHeLa CellsHumansIon ChannelsConnexinsIon Channels

Identifiers

PMID37766427
PMCPMC10645554
OpenAlexW4387107316

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.