Evidence map›Paper›PMID 37766271›Full record

ArticleViruses2023

A CRISPR Screen of HIV Dependency Factors Reveals That

Terry L Hafer, Abby Felton, Yennifer Delgado, Harini Srinivasan, Michael Emerman

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 6 citations in OpenAlex.

  1. CypA is a molecular barrier to HIV emergence from Eastern chimpanzees.bioRxiv : the preprint server for biology · 2026
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Terry L HaferMolecular and Cellular Biology Graduate Program, University of Washington, Seattle, WA 98195, USA.ORCID 0000-0003-1746-8470
Abby FeltonDivisions of Human Biology and Basic Sciences, Fred Hutchinson Cancer Center, Seattle, WA 98109, USA.
Yennifer DelgadoDivisions of Human Biology and Basic Sciences, Fred Hutchinson Cancer Center, Seattle, WA 98109, USA.
Harini SrinivasanBioinformatics Shared Resource, Fred Hutchinson Cancer Center, Seattle, WA 98109, USA.
Michael EmermanDivisions of Human Biology and Basic Sciences, Fred Hutchinson Cancer Center, Seattle, WA 98109, USA.ORCID 0000-0002-4181-6335
Fred Hutch Cancer Center · USUniversity of Washington · US

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Eric Collisson · 1985 to 2026
$296.4M
Collaboratory of AIDS Researchers for Eradication (CARE)UM1AI164567 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DAVID M. MARGOLIS · 2021 to 2026
$31.6M
UW Post-Baccalaureate Research Education Program (PREP)R25GM086304 · NIGMS · UNIVERSITY OF WASHINGTON · PI Gabriele Varani · 2011 to 2026
$5.7M
HIV-CRISPR: A novel approach to the comprehensive discovery of HIV latency factorsDP1DA051110 · NIDA · FRED HUTCHINSON CANCER RESEARCH CENTER · PI EMERMAN, MICHAEL · 2020 to 2024
$4.4M
NCI NIH HHS P30 CA015704NIAID NIH HHS UM1 AI164567NIDA NIH HHS DP1 DA051110NIGMS NIH HHS R25 GM086304
6 · The paper itself

Abstract

We sought to explore the hypothesis that host factors required for HIV-1 replication also play a role in latency reversal. Using a CRISPR gene library of putative HIV dependency factors, we performed a screen to identify genes required for latency reactivation. We identified several HIV-1 dependency factors that play a key role in HIV-1 latency reactivation including ELL, UBE2M, TBL1XR1, HDAC3, AMBRA1, and ALYREF. The knockout of Cyclin T1 (

Indexed as

Cyclin THIV-1HIV InfectionsVirus LatencyAdaptor Proteins, Signal TransducingCD4-Positive T-LymphocytesClustered Regularly Interspaced Short Palindromic RepeatsHumansUbiquitin-Conjugating EnzymesVirus ActivationAdaptor Proteins, Signal TransducingAMBRA1 protein, humanCCNT1 protein, humanCyclin TUBE2M protein, humanUbiquitin-Conjugating EnzymesCCNT1CRISPR screeningCyclin T1dependency factorsHIV latencylatency reversal agent (LRA)P-TEFb complexT cells

Identifiers

PMID37766271
PMCPMC10535513
OpenAlexW4386370363

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.