Evidence map›Paper›PMID 37764951›Full record

ArticlePathogens (Basel, Switzerland)2023

Comparison of the Whole-Genome Sequence of the African Swine Fever Virus from a Mongolian Wild Boar with Genotype II Viruses from Asia and Europe.

Ulaankhuu Ankhanbaatar, Agathe Auer, Gerelmaa Ulziibat, Tirumala B K Settypalli, Delgerzul Gombo-Ochir, Ganzorig Basan, Taichiro Takemura, Erdene-Ochir Tseren-Ochir, Hatem Ouled Ahmed, Irene Kasindi Meki and 5 more

Open access · goldAbstract readComparative Study
In one paragraph

Article in Pathogens (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
3.5field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Challenges in the Application of African Swine Fever Vaccines in Asia.Animals : an open access journal from MDPI · 2024
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 3 countries.

Ulaankhuu AnkhanbaatarLaboratory of Viral Animal Diseases Diagnostic and Surveillance, State Central Veterinary Laboratory, Ulaanbaatar 17029, Mongolia.ORCID 0000-0002-1295-101X
Agathe AuerAnimal Production and Health Laboratory, Joint FAO/IAEA Centre for Nuclear Applications in Food and Agriculture, Department of Nuclear Sciences and Applications, International Atomic Energy Agency, Friedenstrasse 1, 2444 Seibersdorf, Austria.ORCID 0000-0002-4597-9529
Gerelmaa UlziibatLaboratory of Viral Animal Diseases Diagnostic and Surveillance, State Central Veterinary Laboratory, Ulaanbaatar 17029, Mongolia.
Tirumala B K SettypalliAnimal Production and Health Laboratory, Joint FAO/IAEA Centre for Nuclear Applications in Food and Agriculture, Department of Nuclear Sciences and Applications, International Atomic Energy Agency, Friedenstrasse 1, 2444 Seibersdorf, Austria.ORCID 0000-0002-9090-8471
Delgerzul Gombo-OchirLaboratory of Viral Animal Diseases Diagnostic and Surveillance, State Central Veterinary Laboratory, Ulaanbaatar 17029, Mongolia.
Ganzorig BasanLaboratory of Viral Animal Diseases Diagnostic and Surveillance, State Central Veterinary Laboratory, Ulaanbaatar 17029, Mongolia.
Taichiro TakemuraAnimal Production and Health Laboratory, Joint FAO/IAEA Centre for Nuclear Applications in Food and Agriculture, Department of Nuclear Sciences and Applications, International Atomic Energy Agency, Friedenstrasse 1, 2444 Seibersdorf, Austria.
Erdene-Ochir Tseren-OchirSchool of Veterinary Medicine, Mongolian University of Life Sciences, Ulaanbaatar 17029, Mongolia.
Hatem Ouled AhmedAnimal Production and Health Laboratory, Joint FAO/IAEA Centre for Nuclear Applications in Food and Agriculture, Department of Nuclear Sciences and Applications, International Atomic Energy Agency, Friedenstrasse 1, 2444 Seibersdorf, Austria.
Irene Kasindi MekiAnimal Production and Health Laboratory, Joint FAO/IAEA Centre for Nuclear Applications in Food and Agriculture, Department of Nuclear Sciences and Applications, International Atomic Energy Agency, Friedenstrasse 1, 2444 Seibersdorf, Austria.ORCID 0000-0001-5983-2088
Sneha DattaAnimal Production and Health Laboratory, Joint FAO/IAEA Centre for Nuclear Applications in Food and Agriculture, Department of Nuclear Sciences and Applications, International Atomic Energy Agency, Friedenstrasse 1, 2444 Seibersdorf, Austria.
Baba SoumareFood and Agriculture Organization of the United Nations (FAO-UN), Viale delle Terme di Caracalla, 00153 Rome, Italy.
Artem MetlinFood and Agriculture Organization of the United Nations (FAO-UN), Viale delle Terme di Caracalla, 00153 Rome, Italy.
Giovanni CattoliAnimal Production and Health Laboratory, Joint FAO/IAEA Centre for Nuclear Applications in Food and Agriculture, Department of Nuclear Sciences and Applications, International Atomic Energy Agency, Friedenstrasse 1, 2444 Seibersdorf, Austria.
Charles E LamienAnimal Production and Health Laboratory, Joint FAO/IAEA Centre for Nuclear Applications in Food and Agriculture, Department of Nuclear Sciences and Applications, International Atomic Energy Agency, Friedenstrasse 1, 2444 Seibersdorf, Austria.ORCID 0000-0003-1899-7614
International Atomic Energy Agency · ATMongolian University of Life Sciences · MNFood and Agriculture Organization of the United Nations · IT

Funding

PUI-USA-VETLAB PUI-USA-VETLAB
6 · The paper itself

Abstract

African swine fever (ASF) is a highly contagious and severe viral hemorrhagic disease in domestic and wild pigs. ASF seriously affects the global swine industry as the mortality rate can reach 100% with highly virulent strains. In 2007, ASF was introduced into the Caucasus and spread to Russia and later into other European and Asian countries. This study reported the first whole-genome sequence (WGS) of the ASF virus (ASFV) that was detected in a Mongolian wild boar. This sequence was then compared to other WGS samples from Asia and Europe. Results show that the ASFV Genotype II from Mongolia is similar to the Asian Genotype II WGS. However, there were three nucleotide differences found between the Asian and European genome sequences, two of which were non-synonymous. It was also observed that the European Genotype II ASFV WGS was more diverse than that of the Asian counterparts. The study demonstrates that the ASFV Genotype II variants found in wild boars and domestic pigs are highly similar, suggesting these animals might have had direct or indirect contact, potentially through outdoor animal breeding. In conclusion, this study provides a WGS and mutation spectrum of the ASFV Genotype II WGS in Asia and Europe and thus provides important insights into the origin and spread of ASFV in Mongolia.

Indexed as

African Swine FeverAfrican Swine Fever VirusGenome, ViralSus scrofaAnimalsAsiaEuropeGenotypeMongoliaPhylogenySwineWhole Genome SequencingAfrican swine fever virusAsiaEuropewhole-genome sequence

Identifiers

PMID37764951
PMCPMC10536492
OpenAlexW4386498630

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.