Evidence map›Paper›PMID 37764930›Full record

ArticlePathogens (Basel, Switzerland)2023

Human Pegivirus-1 Detection and Genotyping in Brazilian Patients with Fulminant Hepatitis.

Anielly Sarana da Silva, Gabriel Montenegro de Campos, Marcia Guimarães Villanova, Rafael Dos Santos Bezerra, Luciana Maria Mendes Santiago, Rodrigo Haddad, Dimas Tadeu Covas, Marta Giovanetti, Luiz Carlos Junior Alcantara, Maria Carolina Elias and 3 more

Open access · goldAbstract read
In one paragraph

Article in Pathogens (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Observational
  2. Molecular characterization and frequency of human pegivirus type 1 (HPgV-1) in kidney transplant recipients from Central-West Brazil.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2024
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Anielly Sarana da SilvaBlood Center of Ribeirão Preto, Faculty of Medicine of Ribeirão Preto, University of São Paulo, Ribeirão Preto 14051-140, SP, Brazil.
Gabriel Montenegro de CamposBlood Center of Ribeirão Preto, Faculty of Medicine of Ribeirão Preto, University of São Paulo, Ribeirão Preto 14051-140, SP, Brazil.
Marcia Guimarães VillanovaDepartment of Gastroenterology, University Hospital, Faculty of Medicine of Ribeirão Preto, University of São Paulo, Ribeirão Preto 14048-900, SP, Brazil.
Rafael Dos Santos BezerraBlood Center of Ribeirão Preto, Faculty of Medicine of Ribeirão Preto, University of São Paulo, Ribeirão Preto 14051-140, SP, Brazil.
Luciana Maria Mendes SantiagoBlood Center of Ribeirão Preto, Faculty of Medicine of Ribeirão Preto, University of São Paulo, Ribeirão Preto 14051-140, SP, Brazil.
Rodrigo HaddadFaculty of Ceilândia, University of Brasília, Brasília 72220-275, DF, Brazil.ORCID 0000-0003-4699-164X
Dimas Tadeu CovasBlood Center of Ribeirão Preto, Faculty of Medicine of Ribeirão Preto, University of São Paulo, Ribeirão Preto 14051-140, SP, Brazil.
Marta GiovanettiInstituto Rene Rachou, Fundação Oswaldo Cruz, Belo Horizonte 30190-009, MG, Brazil.ORCID 0000-0002-5849-7326
Luiz Carlos Junior AlcantaraSciences and Technologies for Sustainable Development and One Health, Università Campus Bio-Medico di Roma, 00128 Rome, Italy.ORCID 0000-0002-6769-9931
Maria Carolina EliasCenter for Scientific Development, Butantan Institute, São Paulo 05503-900, SP, Brazil.ORCID 0000-0002-0501-8280
Sandra Coccuzzo SampaioCenter for Scientific Development, Butantan Institute, São Paulo 05503-900, SP, Brazil.
Simone KashimaBlood Center of Ribeirão Preto, Faculty of Medicine of Ribeirão Preto, University of São Paulo, Ribeirão Preto 14051-140, SP, Brazil.
Svetoslav Nanev SlavovBlood Center of Ribeirão Preto, Faculty of Medicine of Ribeirão Preto, University of São Paulo, Ribeirão Preto 14051-140, SP, Brazil.ORCID 0000-0003-0805-6140
Universidade de São Paulo · BRInstituto Butantan · BRUniversità Campus Bio-Medico · ITUniversidade de Brasília · BR

Funding

São Paulo Research Foundation 2017/23205-8São Paulo Research Foundation 2018/15826-5São Paulo Research Foundation 2019/08528-0São Paulo Research Foundation 2021/11944-6São Paulo Research Foundation 2022/00910-6São Paulo Research Foundation 2022/10278-5
6 · The paper itself

Abstract

Fulminant hepatitis is a severe clinical disease characterized by a marked decline in liver function and encephalopathy. In a previous survey, using metagenomics in a group of 27 patients with this clinical condition, we observed an expressive quantity of reads of the Human pegivirus-1 (HPgV-1). Therefore, the objective of this study was to evaluate the frequency, molecular features, and HPgV-1 circulating genotypes in patients with fulminant hepatitis. After testing the collected plasma samples, we discovered twelve samples (44.4%) that were positive for HPgV-1 RNA (using both real-time and nested PCR). The positive samples presented a mean cycle threshold (Ct) of 28.5 (±7.3). Genotyping assignments revealed that all HPgV-1 positive samples belonged to the HPgV-1 genotype 2 (both subgenotypes 2A and 2B were identified). Although HPgV-1 is considered a commensal virus, little is known regarding its prevalence and genotypes in cases of fulminant hepatitis. More research is needed to understand whether HPgV-1 can be implicated in clinical disorders and infectious diseases.

Indexed as

fulminant hepatitisgenotypingHPgV-1human pegvirus-1qPCR

Identifiers

PMID37764930
PMCPMC10536510
OpenAlexW4386379977

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.