Evidence map›Paper›PMID 37764112›Full record

ArticleMicroorganisms2023

Functional Whole Genome Screen of Nutrient-Starved

William M Matern, Harley T Harris, Carina Danchik, Marissa McDonald, Gopi Patel, Aashish Srivastava, Thomas R Ioerger, Joel S Bader, Petros C Karakousis

Abstract read
In one paragraph

Article in Microorganisms, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. [Clinical application of next-generation sequencing in early screening of neonatal diseases].Zhongguo dang dai er ke za zhi = Chinese journal of contemporary pediatrics · 2025
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

William M MaternDepartment of Biomedical Engineering, Institute for Computational Medicine, School of Medicine, Johns Hopkins University, Baltimore, MD 21205, USA.
Harley T HarrisCenter for Systems Approaches to Infectious Diseases (C-SAID), School of Medicine, Johns Hopkins University, Baltimore, MD 21205, USA.ORCID 0000-0002-6314-6854
Carina DanchikCenter for Systems Approaches to Infectious Diseases (C-SAID), School of Medicine, Johns Hopkins University, Baltimore, MD 21205, USA.
Marissa McDonaldCenter for Systems Approaches to Infectious Diseases (C-SAID), School of Medicine, Johns Hopkins University, Baltimore, MD 21205, USA.ORCID 0000-0003-4214-0303
Gopi PatelCenter for Systems Approaches to Infectious Diseases (C-SAID), School of Medicine, Johns Hopkins University, Baltimore, MD 21205, USA.
Aashish SrivastavaDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX 77843, USA.ORCID 0000-0002-7295-1169
Thomas R IoergerDepartment of Computer Science and Engineering, Texas A&M University, College Station, TX 77843, USA.
Joel S BaderDepartment of Biomedical Engineering, Institute for Computational Medicine, School of Medicine, Johns Hopkins University, Baltimore, MD 21205, USA.
Petros C KarakousisCenter for Systems Approaches to Infectious Diseases (C-SAID), School of Medicine, Johns Hopkins University, Baltimore, MD 21205, USA.

Funding

Pharmacology and Pharmacometrics CoreP30AI168436 · NIAID · JOHNS HOPKINS UNIVERSITY · PI Richard E. Chaisson, Petros C Karakousis · 2022 to 2026
$6.1M
Mentoring in Immunometabolic Dysregulation in TB and TB/HIVK24AI143447 · NIAID · JOHNS HOPKINS UNIVERSITY · PI KARAKOUSIS, PETROS C · 2019 to 2024
$956k
Characterizing CaeA-mediated rifampin tolerance in MTBR21AI167027 · NIAID · JOHNS HOPKINS UNIVERSITY · PI KARAKOUSIS, PETROS C · 2023 to 2024
$466k
Validation of RelA as a Target for Mycobacterium Tuberculosis PersistersR21AI114507 · NIAID · JOHNS HOPKINS UNIVERSITY · PI KARAKOUSIS, PETROS C · 2015 to 2016
$446k
NIAID NIH HHS K24 AI143447NIAID NIH HHS P30 AI168436NIAID NIH HHS R21 AI114507NIAID NIH HHS R21 AI167027
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

bioinformaticsmolecular geneticsMycobacterium tuberculosispersistencetolerancetransposon sequencingvirulence

Identifiers

PMID37764112
PMCPMC10534295

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.