Evidence map›Paper›PMID 37760707›Full record

ArticleAntibiotics (Basel, Switzerland)2023

Assessing the Activity under Different Physico-Chemical Conditions, Digestibility, and Innocuity of a GAPDH-Related Fish Antimicrobial Peptide and Analogs Thereof.

Samuel Cashman-Kadri, Patrick Lagüe, Ismail Fliss, Lucie Beaulieu

Abstract read
In one paragraph

Article in Antibiotics (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Samuel Cashman-KadriInstitute of Nutrition and Functional Foods (INAF), Université Laval, Québec, QC G1V 0A6, Canada.ORCID 0000-0002-7821-4979
Patrick LagüeDepartment of Biochemistry, Microbiology and Bioinformatics, Université Laval, Quebec, QC G1V 0A6, Canada.ORCID 0000-0002-5236-4979
Ismail FlissInstitute of Nutrition and Functional Foods (INAF), Université Laval, Québec, QC G1V 0A6, Canada.
Lucie BeaulieuInstitute of Nutrition and Functional Foods (INAF), Université Laval, Québec, QC G1V 0A6, Canada.ORCID 0000-0001-8120-1039

Funding

Natural Sciences and Engineering Research Council RGPIN-2019-06076
6 · The paper itself

Abstract

The antimicrobial activity of SJGAP (skipjack tuna GAPDH-related antimicrobial peptide) and four chemical analogs thereof was determined under different physicochemical conditions, including different pH values, the presence of monovalent and divalent cations, and after a heating treatment. The toxicity of these five peptides was also studied with hemolytic activity assays, while their stability under human gastrointestinal conditions was evaluated using a dynamic in vitro digestion model and chromatographic and mass spectrometric analyses. The antibacterial activity of all analogs was found to be inhibited by the presence of divalent cations, while monovalent cations had a much less pronounced impact, even promoting the activity of the native SJGAP. The peptides were also more active at acidic pH values, but they did not all show the same stability following a heat treatment. SJGAP and its analogs did not show significant hemolytic activity (except for one of the analogs at a concentration equivalent to 64 times that of its minimum inhibitory concentration), and the two analogs whose digestibility was studied degraded very rapidly once they entered the stomach compartment of the digestion model. This study highlights for the first time the characteristics of antimicrobial peptides from Scombridae or homologous to GAPDH that are directly related to their potential clinical or food applications.

Indexed as

AMPsantimicrobial activityantimicrobial peptidescationsdigestibilityGAPDHhemolytic activitymembrane permeabilizationpH-dependencesalt resistanceSJGAP

Identifiers

PMID37760707
PMCPMC10525732

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.