Evidence map›Paper›PMID 37758930›Full record

ArticleScientific reports2023

High-volume hybridoma sequencing on the NeuroMabSeq platform enables efficient generation of recombinant monoclonal antibodies and scFvs for neuroscience research.

Keith G Mitchell, Belvin Gong, Samuel S Hunter, Diana Burkart-Waco, Clara E Gavira-O'Neill, Kayla M Templeton, Madeline E Goethel, Malgorzata Bzymek, Leah M MacNiven, Karl D Murray and 3 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 17 citations in OpenAlex.

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  8. Molecular therapy. Methods & clinical development · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Keith G MitchellDepartment of Physiology and Membrane Biology, University of California Davis School of Medicine, Davis, Davis, CA, USA.
Belvin GongDepartment of Physiology and Membrane Biology, University of California Davis School of Medicine, Davis, Davis, CA, USA.
Samuel S HunterBioinformatics Core, Genome Center, University of California Davis, Davis, CA, USA.
Diana Burkart-WacoDNA Technology Core, Genome Center, University of California Davis, Davis, CA, USA.
Clara E Gavira-O'NeillDepartment of Physiology and Membrane Biology, University of California Davis School of Medicine, Davis, Davis, CA, USA.
Kayla M TempletonDepartment of Physiology and Membrane Biology, University of California Davis School of Medicine, Davis, Davis, CA, USA.
Madeline E GoethelDepartment of Physiology and Membrane Biology, University of California Davis School of Medicine, Davis, Davis, CA, USA.
Malgorzata BzymekDepartment of Physiology and Membrane Biology, University of California Davis School of Medicine, Davis, Davis, CA, USA.
Leah M MacNivenDepartment of Physiology and Membrane Biology, University of California Davis School of Medicine, Davis, Davis, CA, USA.
Karl D MurrayDepartment of Physiology and Membrane Biology, University of California Davis School of Medicine, Davis, Davis, CA, USA.
Matthew L SettlesBioinformatics Core, Genome Center, University of California Davis, Davis, CA, USA.
Lutz FroenickeDNA Technology Core, Genome Center, University of California Davis, Davis, CA, USA.
James S TrimmerDepartment of Physiology and Membrane Biology, University of California Davis School of Medicine, Davis, Davis, CA, USA. jtrimmer@ucdavis.edu.
University of California, Davis · US

Funding

Recombinant Immunolabels for Nanoprecise Brain Mapping Across ScalesU24NS109113 · NINDS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI KARL Daniel MURRAY · 2018 to 2026
$9.9M
NINDS NIH HHS U24 NS109113
6 · The paper itself

Abstract

The Neuroscience Monoclonal Antibody Sequencing Initiative (NeuroMabSeq) is a concerted effort to determine and make publicly available hybridoma-derived sequences of monoclonal antibodies (mAbs) valuable to neuroscience research. Over 30 years of research and development efforts including those at the UC Davis/NIH NeuroMab Facility have resulted in the generation of a large collection of mouse mAbs validated for neuroscience research. To enhance dissemination and increase the utility of this valuable resource, we applied a high-throughput DNA sequencing approach to determine immunoglobulin heavy and light chain variable domain sequences from source hybridoma cells. The resultant set of sequences was made publicly available as a searchable DNA sequence database (neuromabseq.ucdavis.edu) for sharing, analysis and use in downstream applications. We enhanced the utility, transparency, and reproducibility of the existing mAb collection by using these sequences to develop recombinant mAbs. This enabled their subsequent engineering into alternate forms with distinct utility, including alternate modes of detection in multiplexed labeling, and as miniaturized single chain variable fragments or scFvs. The NeuroMabSeq website and database and the corresponding recombinant antibody collection together serve as a public DNA sequence repository of mouse mAb heavy and light chain variable domain sequences and as an open resource for enhancing dissemination and utility of this valuable collection of validated mAbs.

Indexed as

Antibodies, MonoclonalImmunosuppressive AgentsAnimalsDatabases, Nucleic AcidHybridomasMiceReproducibility of ResultsAntibodies, MonoclonalImmunosuppressive Agents

Identifiers

PMID37758930
PMCPMC10533561
OpenAlexW4387106379

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.