Evidence map›Paper›PMID 37758910›Full record

ArticleHuman genetics2023

A SACS deletion variant in Great Pyrenees dogs causes autosomal recessive neuronal degeneration.

Kari J Ekenstedt, Katie M Minor, G Diane Shelton, James J Hammond, Andrew D Miller, Susan M Taylor, Yanyun Huang, James R Mickelson

Open access · hybridAbstract read
In one paragraph

Article in Human genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 82% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 7 institutions in 2 countries.

Kari J EkenstedtDepartment of Basic Medical Sciences, College of Veterinary Medicine, Purdue University, Lynn Hall, 625 Harrison Street, West Lafayette, IN, 47907, USA. kje0003@purdue.edu.ORCID http://orcid.org/0000-0002-3213-7883
Katie M MinorDepartment of Veterinary and Biomedical Sciences, College of Veterinary Medicine, University of Minnesota, Saint Paul, MN, 55108, USA.ORCID http://orcid.org/0000-0002-5472-5088
G Diane SheltonDepartment of Pathology, School of Medicine, University of California San Diego, La Jolla, CA, 92093, USA.ORCID http://orcid.org/0000-0002-3332-1359
James J HammondDepartment of Neurology, Pieper Memorial Veterinary Center, Middletown, CT, 06457, USA.
Andrew D MillerSection of Anatomic Pathology, Department of Population Medicine and Diagnostic Sciences, College of Veterinary Medicine, Cornell University, Ithaca, NY, 14853, USA.ORCID http://orcid.org/0000-0001-6350-5581
Susan M TaylorDepartment of Small Animal Clinical Sciences, Western College of Veterinary Medicine, University of Saskatchewan, Saskatoon, SK, S7N 5B4, Canada.
Yanyun HuangPrairie Diagnostic Services, Inc., Saskatoon, SK, S7N 5B4, Canada.
James R MickelsonDepartment of Veterinary and Biomedical Sciences, College of Veterinary Medicine, University of Minnesota, Saint Paul, MN, 55108, USA.ORCID http://orcid.org/0000-0001-6951-0234
University of Minnesota · USCornell University · USMemorial Medical Center · USPurdue University West Lafayette · USShared Health · CAUniversity of California San Diego · USUniversity of Saskatchewan · CA

Funding

Novel Genetic Models for Vertebral AbnormalitiesK01OD027051 · OD · PURDUE UNIVERSITY · PI EKENSTEDT, KARI J · 2019 to 2023
$627k
NIH HHS K01 OD027051
6 · The paper itself

Abstract

ARSACS (autosomal recessive spastic ataxia of Charlevoix-Saguenay) is a human neurological disorder characterized by progressive cerebellar ataxia and peripheral neuropathy. A recently recognized disorder in Great Pyrenees dogs is similarly characterized by widespread central nervous system degeneration leading to progressive cerebellar ataxia and spasticity, combined with peripheral neuropathy. Onset of clinical signs occurred in puppies as young as 4 months of age, with slow progression over several years. A multi-generation pedigree suggested an autosomal recessive mode of inheritance. Histopathology revealed consistent cerebellar Purkinje cell degeneration, neuronal degeneration in brainstem nuclei, widespread spinal cord white matter degeneration, ganglion cell degeneration, inappropriately thin myelin sheaths or fully demyelinated peripheral nerve fibers, and normal or only mild patterns of denervation atrophy in skeletal muscles. Genome-wide single nucleotide polymorphism (SNP) genotype data was collected from 6 cases and 26 controls, where homozygosity mapping identified a 3.3 Mb region on CFA25 in which all cases were homozygous and all controls were either heterozygous or homozygous for alternate haplotypes. This region tagged the SACS gene where variants are known to cause ARSACS. Sanger sequencing of SACS in affected dogs identified a 4 bp deletion that causes a frame shift and truncates 343 amino acids from the C terminus of the encoded sacsin protein (p.Val4244AlafsTer32). Our clinical and histopathological descriptions of this canine disorder contribute to the description of human ARSACS and represents the first naturally occurring large animal model of this disorder.

Indexed as

Cerebellar AtaxiaPeripheral Nervous System DiseasesSpinocerebellar AtaxiasAnimalsDogsHeat-Shock ProteinsMuscle SpasticityMutationHeat-Shock Proteins

Identifiers

PMID37758910
PMCPMC10602964
OpenAlexW4387085255

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.