Evidence map›Paper›PMID 37758868›Full record

ArticleCommunications biology2023

Development of a 1:1-binding biparatopic anti-TNFR2 antagonist by reducing signaling activity through epitope selection.

Hiroki Akiba, Junso Fujita, Tomoko Ise, Kentaro Nishiyama, Tomoko Miyata, Takayuki Kato, Keiichi Namba, Hiroaki Ohno, Haruhiko Kamada, Satoshi Nagata and 1 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.6field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. The Evolving Applications of Bispecific Antibodies: Reaping the Harvest of Early Sowing and Planting New Seeds.BioDrugs : clinical immunotherapeutics, biopharmaceuticals and gene therapy · 2025
    Review
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Hiroki AkibaGraduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto, 606-8501, Japan. hakiba@pharm.kyoto-u.ac.jp.ORCID http://orcid.org/0000-0002-1450-5873
Junso FujitaGraduate School of Frontier Biosciences, Osaka University, Suita, Osaka, 565-0871, Japan.ORCID http://orcid.org/0000-0003-1273-3917
Tomoko IseCenter for Drug Design Research, National Institutes of Biomedical Innovation, Health and Nutrition, Ibaraki, Osaka, 562-0011, Japan.
Kentaro NishiyamaGraduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto, 606-8501, Japan.ORCID http://orcid.org/0000-0002-2238-2463
Tomoko MiyataGraduate School of Frontier Biosciences, Osaka University, Suita, Osaka, 565-0871, Japan.ORCID http://orcid.org/0000-0002-5543-7459
Takayuki KatoInstitute of Protein Research, Osaka University, Suita, Osaka, 565-0871, Japan.ORCID http://orcid.org/0000-0002-8879-6685
Keiichi NambaGraduate School of Frontier Biosciences, Osaka University, Suita, Osaka, 565-0871, Japan.ORCID http://orcid.org/0000-0003-2911-5875
Hiroaki OhnoGraduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto, 606-8501, Japan.ORCID http://orcid.org/0000-0002-3246-4809
Haruhiko KamadaGraduate School of Pharmaceutical Sciences, Kyoto University, Sakyo-ku, Kyoto, 606-8501, Japan.ORCID http://orcid.org/0000-0002-2478-3818
Satoshi NagataCenter for Drug Design Research, National Institutes of Biomedical Innovation, Health and Nutrition, Ibaraki, Osaka, 562-0011, Japan. Satoshi-Nagata@nibiohn.go.jp.ORCID http://orcid.org/0000-0001-9156-5215
Kouhei TsumotoCenter for Drug Design Research, National Institutes of Biomedical Innovation, Health and Nutrition, Ibaraki, Osaka, 562-0011, Japan. tsumoto@bioeng.t.u-tokyo.ac.jp.ORCID http://orcid.org/0000-0001-7643-5164
Kyoto University · JPNational Institute of Biomedical Innovation, Health and Nutrition · JPThe University of Osaka · JPProtein Research Foundation · JPSPring-8 · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Conventional bivalent antibodies against cell surface receptors often initiate unwanted signal transduction by crosslinking two antigen molecules. Biparatopic antibodies (BpAbs) bind to two different epitopes on the same antigen, thus altering crosslinking ability. In this study, we develop BpAbs against tumor necrosis factor receptor 2 (TNFR2), which is an attractive immune checkpoint target. Using different pairs of antibody variable regions specific to topographically distinct TNFR2 epitopes, we successfully regulate the size of BpAb-TNFR2 immunocomplexes to result in controlled agonistic activities. Our series of results indicate that the relative positions of the two epitopes recognized by the BpAb are critical for controlling its signaling activity. One particular antagonist, Bp109-92, binds TNFR2 in a 1:1 manner without unwanted signal transduction, and its structural basis is determined using cryo-electron microscopy. This antagonist suppresses the proliferation of regulatory T cells expressing TNFR2. Therefore, the BpAb format would be useful in designing specific and distinct antibody functions.

Indexed as

AntibodiesReceptors, Tumor Necrosis Factor, Type IICryoelectron MicroscopyEpitopesSignal TransductionAntibodiesEpitopesReceptors, Tumor Necrosis Factor, Type II

Identifiers

PMID37758868
PMCPMC10533564
OpenAlexW4387106035

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.