Evidence map›Paper›PMID 37758674›Full record

ArticleBMJ open2023

Identifying potential biases in code sequences in primary care electronic healthcare records: a retrospective cohort study of the determinants of code frequency.

Thomas Beaney, Jonathan Clarke, David Salman, Thomas Woodcock, Azeem Majeed, Mauricio Barahona, Paul Aylin

Abstract read
In one paragraph

Article in BMJ open, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

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  6. Continuity of care in general practice and secondary care: retrospective cohort study.The British journal of general practice : the journal of the Royal College of General Practitioners · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Thomas BeaneyDepartment of Primary Care and Public Health, Imperial College London, London, UK thomas.beaney@imperial.ac.uk.ORCID 0000-0001-9709-7264
Jonathan ClarkeDepartment of Mathematics, Imperial College London, London, UK.ORCID 0000-0003-1495-7746
David SalmanDepartment of Primary Care and Public Health, Imperial College London, London, UK.ORCID 0000-0002-1481-8829
Thomas WoodcockDepartment of Primary Care and Public Health, Imperial College London, London, UK.
Azeem MajeedDepartment of Primary Care and Public Health, Imperial College London, London, UK.ORCID 0000-0002-2357-9858
Mauricio BarahonaDepartment of Mathematics, Imperial College London, London, UK.ORCID 0000-0002-1089-5675
Paul AylinDepartment of Primary Care and Public Health, Imperial College London, London, UK.

Funding

Department of HealthWellcome Trust
6 · The paper itself

Abstract

objectivesTo determine whether the frequency of diagnostic codes for long-term conditions (LTCs) in primary care electronic healthcare records (EHRs) is associated with (1) disease coding incentives, (2) General Practice (GP), (3) patient sociodemographic characteristics and (4) calendar year of diagnosis.

designRetrospective cohort study.

settingGPs in England from 2015 to 2022 contributing to the Clinical Practice Research Datalink Aurum dataset.

participantsAll patients registered to a GP with at least one incident LTC diagnosed between 1 January 2015 and 31 December 2019. PRIMARY AND SECONDARY OUTCOME MEASURES: The number of diagnostic codes for an LTC in (1) the first and (2) the second year following diagnosis, stratified by inclusion in the Quality and Outcomes Framework (QOF) financial incentive programme.

results3 113 724 patients were included, with 7 723 365 incident LTCs. Conditions included in QOF had higher rates of annual coding than conditions not included in QOF (1.03 vs 0.32 per year, p<0.0001). There was significant variation in code frequency by GP which was not explained by patient sociodemographics. We found significant associations with patient sociodemographics, with a trend towards higher coding rates in people living in areas of higher deprivation for both QOF and non-QOF conditions. Code frequency was lower for conditions with follow-up time in 2020, associated with the onset of the COVID-19 pandemic.

conclusionsThe frequency of diagnostic codes for newly diagnosed LTCs is influenced by factors including patient sociodemographics, disease inclusion in QOF, GP practice and the impact of the COVID-19 pandemic. Natural language processing or other methods using temporally ordered code sequences should account for these factors to minimise potential bias.

Indexed as

COVID-19BiasElectronicsHumansPandemicsPrimary Health CareRetrospective Studiesepidemiologyhealth informaticsprimary health carestatistics & research methods

Identifiers

PMID37758674
PMCPMC10537851

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