Evidence map›Paper›PMID 37756525›Full record

ArticleBlood2023

Germ line variant GFI1-36N affects DNA repair and sensitizes AML cells to DNA damage and repair therapy.

Daria Frank, Pradeep Kumar Patnana, Jan Vorwerk, Lianghao Mao, Lavanya Mokada Gopal, Noelle Jung, Thorben Hennig, Leo Ruhnke, Joris Maximillian Frenz, Maithreyan Kuppusamy and 49 more

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In one paragraph

Article in Blood, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
7.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 22 citations in OpenAlex.

  1. Trial
  2. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

59 authors at 20 institutions in 4 countries.

Daria FrankDepartment of Medicine A, Hematology, Oncology and Pneumology, University Hospital Münster, Münster, Germany.
Pradeep Kumar PatnanaDepartment of Medicine A, Hematology, Oncology and Pneumology, University Hospital Münster, Münster, Germany.ORCID 0000-0002-2605-4475
Jan VorwerkDepartment of Medicine A, Hematology, Oncology and Pneumology, University Hospital Münster, Münster, Germany.
Lianghao MaoProteomics and Cancer Cell Signaling Group, Clinical Cooperation Unit Pediatric Leukemia, German Cancer Research Center and Department of Pediatric Oncology, Hematology and Immunology, University of Heidelberg, Heidelberg, Germany.
Lavanya Mokada GopalProteomics and Cancer Cell Signaling Group, Clinical Cooperation Unit Pediatric Leukemia, German Cancer Research Center and Department of Pediatric Oncology, Hematology and Immunology, University of Heidelberg, Heidelberg, Germany.
Noelle JungProteomics and Cancer Cell Signaling Group, Clinical Cooperation Unit Pediatric Leukemia, German Cancer Research Center and Department of Pediatric Oncology, Hematology and Immunology, University of Heidelberg, Heidelberg, Germany.
Thorben HennigProteomics and Cancer Cell Signaling Group, Clinical Cooperation Unit Pediatric Leukemia, German Cancer Research Center and Department of Pediatric Oncology, Hematology and Immunology, University of Heidelberg, Heidelberg, Germany.
Leo RuhnkeDepartment of Internal Medicine I, University Hospital Dresden, Technical University Dresden, Dresden, Germany.
Joris Maximillian FrenzProteomics and Cancer Cell Signaling Group, Clinical Cooperation Unit Pediatric Leukemia, German Cancer Research Center and Department of Pediatric Oncology, Hematology and Immunology, University of Heidelberg, Heidelberg, Germany.ORCID 0000-0001-8696-3817
Maithreyan KuppusamyProteomics and Cancer Cell Signaling Group, Clinical Cooperation Unit Pediatric Leukemia, German Cancer Research Center and Department of Pediatric Oncology, Hematology and Immunology, University of Heidelberg, Heidelberg, Germany.ORCID 0000-0001-6866-0417
Robert AutryHopp Children's Cancer Center, Heidelberg, Germany.
Lanying WeiDepartment of Medicine A, Hematology, Oncology and Pneumology, University Hospital Münster, Münster, Germany.ORCID 0000-0002-4281-8017
Kaiyan SunDepartment of Medicine A, Hematology, Oncology and Pneumology, University Hospital Münster, Münster, Germany.
Helal Mohammed Mohammed AhmedDepartment of Medicine A, Hematology, Oncology and Pneumology, University Hospital Münster, Münster, Germany.ORCID 0000-0001-8298-4135
Axel KünstnerMedical Systems Biology Group, Lübeck Institute of Experimental Dermatology, University of Lübeck, Lübeck, Germany.ORCID 0000-0003-0692-2105
Hauke BuschMedical Systems Biology Group, Lübeck Institute of Experimental Dermatology, University of Lübeck, Lübeck, Germany.ORCID 0000-0003-4763-4521
Heiko MüllerMLL Munich Leukemia Laboratory, Munich, Germany.
Stephan HutterMLL Munich Leukemia Laboratory, Munich, Germany.ORCID 0000-0003-2432-8898
Gregor HoermannMLL Munich Leukemia Laboratory, Munich, Germany.
Longlong LiuDepartment of Medicine A, Hematology, Oncology and Pneumology, University Hospital Münster, Münster, Germany.ORCID 0000-0003-2156-1715
Xiaoqing XieDepartment of Medicine A, Hematology, Oncology and Pneumology, University Hospital Münster, Münster, Germany.
Yahya Al-MataryDepartment of Dermatology, University Hospital Essen, Essen, Germany.
Subbaiah Chary NimmagaddaDepartment of Medicine A, Hematology, Oncology and Pneumology, University Hospital Münster, Münster, Germany.
Fiorella Charles CanoDepartment of Hematology, Hemostasis, Oncology and Stem Cell Transplantation, Hannover Medical School, Hannover, Germany.
Michael HeuserDepartment of Hematology, Hemostasis, Oncology and Stem Cell Transplantation, Hannover Medical School, Hannover, Germany.
Felicitas TholDepartment of Hematology, Hemostasis, Oncology and Stem Cell Transplantation, Hannover Medical School, Hannover, Germany.
Gudrun GöhringDepartment of Human Genetics, Hannover Medical School, Hannover, Germany.
Doris SteinemannDepartment of Human Genetics, Hannover Medical School, Hannover, Germany.
Jürgen ThomaleInstitute of Cell Biology, University Hospital Essen, Essen, Germany.
Theo LeitnerDepartment of Hematology and Oncology, University Hospital of Schleswig-Holstein, University Cancer Center Schleswig-Holstein, University of Lübeck, Lübeck, Germany.
Anja FischerInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technische Universität München, Munich, Germany.
Roland RadInstitute of Molecular Oncology and Functional Genomics, School of Medicine, Technische Universität München, Munich, Germany.
Christoph RölligHopp Children's Cancer Center, Heidelberg, Germany.ORCID 0000-0002-3791-0548
Heidi AltmannHopp Children's Cancer Center, Heidelberg, Germany.
Desiree KunadtHopp Children's Cancer Center, Heidelberg, Germany.ORCID 0000-0001-8750-5308
Wolfgang E BerdelDepartment of Medicine A, Hematology, Oncology and Pneumology, University Hospital Münster, Münster, Germany.ORCID 0000-0002-3030-6567
Jana HüveFluorescence Microscopy Facility Münster, Institute of Medical Physics and Biophysics, University of Münster, Münster, Germany.
Felix NeumannFluorescence Microscopy Facility Münster, Institute of Medical Physics and Biophysics, University of Münster, Münster, Germany.
Jürgen KlingaufFluorescence Microscopy Facility Münster, Institute of Medical Physics and Biophysics, University of Münster, Münster, Germany.
Virginie CalderonBioinformatic Core Facility, Institut de Recherches Cliniques de Montréal, Montréal, QC, Canada.
Bertram OpalkaDepartment of Hematology and Stem Cell Transplantation, University Hospital Essen, Essen, Germany.
Ulrich DührsenDepartment of Hematology and Stem Cell Transplantation, University Hospital Essen, Essen, Germany.
Frank RosenbauerInstitute of Molecular Tumor Biology, Faculty of Medicine, University of Münster, Münster, Germany.
Martin DugasInstitute of Medical Informatics, University Hospital Heidelberg, Heidelberg, Germany.ORCID 0000-0001-9740-0788
Julian VargheseInstitute of Medical Informatics, University of Münster, Münster, Germany.
Hans Christian ReinhardtDepartment of Hematology and Stem Cell Transplantation, University Hospital Essen, Essen, Germany.
Nikolas von BubnoffDepartment of Hematology and Oncology, University Hospital of Schleswig-Holstein, University Cancer Center Schleswig-Holstein, University of Lübeck, Lübeck, Germany.ORCID 0000-0001-9593-8947
Tarik MöröyInstitut de Recherches Cliniques de Montréal, Montreal, QC, Canada.
Georg LenzDepartment of Medicine A, Hematology, Oncology and Pneumology, University Hospital Münster, Münster, Germany.
Aarif M N BatchaInstitute of Medical Data Processing, Biometrics and Epidemiology, Faculty of Medicine, Ludwig Maximilians University Munich, Munich, Germany.ORCID 0000-0002-7972-7506
Marianna GiorgiRoswell Park Comprehensive Cancer Center, Jacobs School of Medicine and Biomedical Sciences, Buffalo, NY.
Murugan SelvamRoswell Park Comprehensive Cancer Center, Jacobs School of Medicine and Biomedical Sciences, Buffalo, NY.ORCID 0000-0002-5939-2251
Eunice WangRoswell Park Comprehensive Cancer Center, Jacobs School of Medicine and Biomedical Sciences, Buffalo, NY.
Shannon K McWeeneyDivision of Bioinformatics and Computational Biology, Department of Medical Informatics and Clinical Epidemiology, Oregon Health & Science University, Portland, OR.ORCID 0000-0001-8333-6607
Jeffrey W TynerKnight Cancer Institute, Oregon Health & Science University, Portland, OR.
Friedrich StölzelDepartment of Internal Medicine I, University Hospital Dresden, Technical University Dresden, Dresden, Germany.ORCID 0000-0003-0653-5332
Matthias MannDepartment of Proteomics and Signal Transduction, Max Planck Institute of Biochemistry, Munich, Germany.ORCID 0000-0003-1292-4799
Ashok Kumar JayaveluProteomics and Cancer Cell Signaling Group, Clinical Cooperation Unit Pediatric Leukemia, German Cancer Research Center and Department of Pediatric Oncology, Hematology and Immunology, University of Heidelberg, Heidelberg, Germany.ORCID 0000-0002-3292-1117
Cyrus KhandanpourDepartment of Medicine A, Hematology, Oncology and Pneumology, University Hospital Münster, Münster, Germany.ORCID 0000-0003-4655-6269
University Hospital Münster · DEGerman Cancer Research Center · DEUniversity of Münster · DEEssen University Hospital · DEMedizinische Hochschule Hannover · DEHopp Children's Cancer Center Heidelberg · DEMunich Leukemia Laboratory (Germany) · DERoswell Park Comprehensive Cancer Center · USUniversity Hospital Schleswig-Holstein · DEMontreal Clinical Research Institute · CAOregon Health & Science University · USUniversity of Lübeck · DEChongqing University · CNFirst Affiliated Hospital of Guangzhou Medical University · CNHeidelberg University · DELudwig-Maximilians-Universität München · DEMax Planck Institute of Biochemistry · DETechnical University of Munich · DETechnische Universität Dresden · DETUM Klinikum · DE

Funding

Tumor Intrinsic and Microenvironmental Mechanisms Driving Drug Combination Efficacy and Resistance in AMLU54CA224019 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI BRIAN J DRUKER, Shannon K. McWeeney · 2017 to 2026
$13.9M
NCI NIH HHS U54 CA224019
6 · The paper itself

Abstract

abstractGrowth factor independence 1 (GFI1) is a DNA-binding transcription factor and a key regulator of hematopoiesis. GFI1-36N is a germ line variant, causing a change of serine (S) to asparagine (N) at position 36. We previously reported that the GFI1-36N allele has a prevalence of 10% to 15% among patients with acute myeloid leukemia (AML) and 5% to 7% among healthy Caucasians and promotes the development of this disease. Using a multiomics approach, we show here that GFI1-36N expression is associated with increased frequencies of chromosomal aberrations, mutational burden, and mutational signatures in both murine and human AML and impedes homologous recombination (HR)-directed DNA repair in leukemic cells. GFI1-36N exhibits impaired binding to N-Myc downstream-regulated gene 1 (Ndrg1) regulatory elements, causing decreased NDRG1 levels, which leads to a reduction of O6-methylguanine-DNA-methyltransferase (MGMT) expression levels, as illustrated by both transcriptome and proteome analyses. Targeting MGMT via temozolomide, a DNA alkylating drug, and HR via olaparib, a poly-ADP ribose polymerase 1 inhibitor, caused synthetic lethality in human and murine AML samples expressing GFI1-36N, whereas the effects were insignificant in nonmalignant GFI1-36S or GFI1-36N cells. In addition, mice that received transplantation with GFI1-36N leukemic cells treated with a combination of temozolomide and olaparib had significantly longer AML-free survival than mice that received transplantation with GFI1-36S leukemic cells. This suggests that reduced MGMT expression leaves GFI1-36N leukemic cells particularly vulnerable to DNA damage initiating chemotherapeutics. Our data provide critical insights into novel options to treat patients with AML carrying the GFI1-36N variant.

Indexed as

DNA-Binding ProteinsLeukemia, Myeloid, AcuteAnimalsDNADNA DamageDNA RepairGerm CellsHumansMiceTemozolomideTranscription FactorsDNADNA-Binding ProteinsGFI1 protein, humanTemozolomideTranscription Factors

Identifiers

PMID37756525
PMCPMC10733838
OpenAlexW4387088874

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.