Evidence map›Paper›PMID 37756337›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2023

Intrinsic disorder and conformational coexistence in auxin coreceptors.

Sigurd Ramans-Harborough, Arnout P Kalverda, Iain W Manfield, Gary S Thompson, Martin Kieffer, Veselina Uzunova, Mussa Quareshy, Justyna M Prusinska, Suruchi Roychoudhry, Ken-Ichiro Hayashi and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
4.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

  1. Self-Guided Molecular Simulation Methods.International journal of molecular sciences · 2025
    Review
  2. Article
  3. Recent Developments in Amber Biomolecular Simulations.Journal of chemical information and modeling · 2025
    Article
  4. Article
  5. Article
  6. Review
  7. Auxin research: creating tools for a greener future.Journal of experimental botany · 2023
    Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 2 countries.

Sigurd Ramans-HarboroughSchool of Biology, Faculty of Biological Sciences, University of Leeds, Leeds LS2 9JT, United Kingdom.ORCID 0000-0002-0361-5647
Arnout P KalverdaAstbury Centre for Structural Molecular Biology, Faculty of Biological Sciences, University of Leeds, Leeds LS2 9JT, United Kingdom.
Iain W ManfieldAstbury Centre for Structural Molecular Biology, Faculty of Biological Sciences, University of Leeds, Leeds LS2 9JT, United Kingdom.ORCID 0000-0003-3765-0325
Gary S ThompsonWellcome Biological Nuclear Magnetic Resonance Facility, Division of Natural Sciences, University of Kent, Canterbury CT2 7NJ, United Kingdom.ORCID 0000-0001-9399-7636
Martin KiefferSchool of Biology, Faculty of Biological Sciences, University of Leeds, Leeds LS2 9JT, United Kingdom.ORCID 0000-0002-0987-2716
Veselina UzunovaSchool of Life Sciences, University of Warwick, Coventry CV4 7AL, United Kingdom.
Mussa QuareshySchool of Life Sciences, University of Warwick, Coventry CV4 7AL, United Kingdom.ORCID 0000-0001-8115-9803
Justyna M PrusinskaSchool of Life Sciences, University of Warwick, Coventry CV4 7AL, United Kingdom.
Suruchi RoychoudhrySchool of Biology, Faculty of Biological Sciences, University of Leeds, Leeds LS2 9JT, United Kingdom.
Ken-Ichiro HayashiDepartment of Bioscience, Okayama University of Science, Okayama 700-0005, Japan.ORCID 0000-0002-9812-2801
Richard NapierSchool of Life Sciences, University of Warwick, Coventry CV4 7AL, United Kingdom.ORCID 0000-0002-0605-518X
Charo Del GenioCentre for Fluid and Complex Systems, Coventry University, Coventry CV1 5FB, United Kingdom.ORCID 0000-0001-9958-017X
Stefan KepinskiSchool of Biology, Faculty of Biological Sciences, University of Leeds, Leeds LS2 9JT, United Kingdom.
University of Leeds · GBUniversity of Warwick · GBCoventry University · GBOkayama University of Science · JPUniversity of Kent · GB

Funding

Biotechnology and Biological Sciences Research Council BB/I532402/1Biotechnology and Biological Sciences Research Council BB/L010623/1Medical Research Council MR/T020652/1Wellcome TrustWellcome Trust 094232
6 · The paper itself

Abstract

AUXIN/INDOLE 3-ACETIC ACID (Aux/IAA) transcriptional repressor proteins and the TRANSPORT INHIBITOR RESISTANT 1/AUXIN SIGNALING F-BOX (TIR1/AFB) proteins to which they bind act as auxin coreceptors. While the structure of TIR1 has been solved, structural characterization of the regions of the Aux/IAA protein responsible for auxin perception has been complicated by their predicted disorder. Here, we use NMR, CD and molecular dynamics simulation to investigate the N-terminal domains of the Aux/IAA protein IAA17/AXR3. We show that despite the conformational flexibility of the region, a critical W-P bond in the core of the Aux/IAA degron motif occurs at a strikingly high (1:1) ratio of

Indexed as

ArabidopsisArabidopsis ProteinsF-Box ProteinsGene Expression Regulation, PlantIndoleacetic AcidsReceptors, Cell SurfaceArabidopsis ProteinsF-Box ProteinsIndoleacetic AcidsReceptors, Cell SurfaceAux/IAAauxindisorderIDPTIR1

Identifiers

PMID37756337
PMCPMC10556615
OpenAlexW4387092795

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.