Evidence map›Paper›PMID 37755536›Full record

ArticleArchives of microbiology2023

Identification of two putative novel deltapartitiviruses and an enamovirus in coriander transcriptomes.

V Kavi Sidharthan, Damini Diksha, Ravindra Singh, Sharda Choudhary, Mahantesha B N Naika, V K Baranwal

Abstract read
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In one paragraph

Article in Archives of microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.8field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

V Kavi Sidharthan *ICFRE-Institute of Forest Biodiversity, Hyderabad, India. kavi.icfre@gmail.com.
Damini Diksha *Division of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi, India.
Ravindra SinghICAR-National Research Centre on Seed Spices, Tabiji, Ajmer, Rajasthan, India.
Sharda ChoudharyICAR-National Research Centre on Seed Spices, Tabiji, Ajmer, Rajasthan, India.
Mahantesha B N NaikaDepartment of Biotechnology and Crop Improvement, K. R. C. College of Horticulture, University of Horticultural Sciences, Arabhavi, Bagalkot, Karnataka, India.
V K BaranwalDivision of Plant Pathology, ICAR-Indian Agricultural Research Institute, New Delhi, India. vbaranwal2001@yahoo.com.
Indian Agricultural Research Institute · INNational Research Centre on Seed Spices · INInstitute of Forest Genetics and Tree Breeding · INUniversity of Horticultural Sciences Bagalkote · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Coriander is a herbaceous spice and condiment crop also known for its medicinal properties. The present study identified two putative novel deltapartitiviruses and an enamovirus tentatively named as Coriandrum sativum deltapartitivirus 1, 2 (CsDPV1, 2) and Coriandrum sativum enamovirus (CsEV) in the publicly available transcriptome-assembled contigs derived from coriander grown in India. CsDPV1 and 2 contained tripartite and bipartite genomes, respectively, with each genome segment encoding a single open reading frame (ORF). CsEV contained five ORFs encoding proteins P0, P1, P2, P3 and P5. Phylogenetic analysis revealed three distinct subgroups of deltapartitiviruses wherein CsDPV1 and 2 grouped in subgroup 3 and 1, respectively, whilst CsEV formed a distinct sub-clade within enamoviruses. Further, the presence of CsDPV2 in fruit samples of one of the cultivars from where the virus was identified was confirmed through RT-PCR assay and Sanger sequencing. The study highlights the need for further studies on understanding the importance and the biological properties of identified novel viruses.

Indexed as

CoriandrumLuteoviridaeFruitPhylogenyTranscriptomeCorianderDeltapartitivirusEnamovirusNovelPublic domainRT-PCR

Identifiers

PMID37755536
OpenAlexW4387077550

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.