Evidence map›Paper›PMID 37755465›Full record

ArticleBiological cybernetics2023

Single-compartment model of a pyramidal neuron, fitted to recordings with current and conductance injection.

Anton V Chizhov, Dmitry V Amakhin, A Erdem Sagtekin, Mathieu Desroches

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Biological cybernetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 4 countries.

Anton V ChizhovMathNeuro Team, Inria Centre at Universite Cote d'Azur, Sophia Antipolis, France. anton.chizhov@inria.fr.
Dmitry V AmakhinLaboratory of Molecular Mechanisms of Neural Interactions, Sechenov Institute of Evolutionary Physiology and Biochemistry of the Russian Academy of Sciences, Saint Petersburg, Russia.
A Erdem SagtekinIstanbul Technical University, Istanbul, Turkey.
Mathieu DesrochesMathNeuro Team, Inria Centre at Universite Cote d'Azur, Sophia Antipolis, France.
Institut national de recherche en informatique et en automatique · FRInstitute of Evolutionary Physiology and Biochemistry · RUIstanbul Technical University · TR

Funding

Russian Science Foundation 21-15-00416
6 · The paper itself

Abstract

For single neuron models, reproducing characteristics of neuronal activity such as the firing rate, amplitude of spikes, and threshold potentials as functions of both synaptic current and conductance is a challenging task. In the present work, we measure these characteristics of regular spiking cortical neurons using the dynamic patch-clamp technique, compare the data with predictions from the standard Hodgkin-Huxley and Izhikevich models, and propose a relatively simple five-dimensional dynamical system model, based on threshold criteria. The model contains a single sodium channel with slow inactivation, fast activation and moderate deactivation, as well as, two fast repolarizing and slow shunting potassium channels. The model quantitatively reproduces characteristics of steady-state activity that are typical for a cortical pyramidal neuron, namely firing rate not exceeding 30 Hz; critical values of the stimulating current and conductance which induce the depolarization block not exceeding 80 mV and 3, respectively (both values are scaled by the resting input conductance); extremum of hyperpolarization close to the midpoint between spikes. The analysis of the model reveals that the spiking regime appears through a saddle-node-on-invariant-circle bifurcation, and the depolarization block is reached through a saddle-node bifurcation of cycles. The model can be used for realistic network simulations, and it can also be implemented within the so-called mean-field, refractory density framework.

Indexed as

NeuronsPyramidal CellsAction PotentialsPotassium ChannelsPotassium ChannelsDynamic patch-clampDynamic thresholdHodgkin–Huxley approximationPyramidal neuronShunting effect

Identifiers

PMID37755465
OpenAlexW4387078245

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.