Evidence map›Paper›PMID 37752498›Full record

ArticleBMC pulmonary medicine2023

Tracheal microbiome and metabolome profiling in iatrogenic subglottic tracheal stenosis.

Zeqin Fan, Lihui Zhang, Li Wei, Xiaoxian Huang, Mei Yang, Xiqian Xing

Open access · goldAbstract read
In one paragraph

Article in BMC pulmonary medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 3 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Zeqin FanDepartment of Respiratory and Critical Care Medicine, Affiliated Hospital of Yunnan University, Kunming, China.
Lihui ZhangDepartment of Respiratory and Critical Care Medicine, Affiliated Hospital of Yunnan University, Kunming, China.
Li WeiDepartment of Respiratory and Critical Care Medicine, Affiliated Hospital of Yunnan University, Kunming, China.
Xiaoxian HuangDepartment of Respiratory and Critical Care Medicine, Affiliated Hospital of Yunnan University, Kunming, China.
Mei YangDepartment of Respiratory and Critical Care Medicine, Affiliated Hospital of Yunnan University, Kunming, China.
Xiqian XingDepartment of Respiratory and Critical Care Medicine, Affiliated Hospital of Yunnan University, Kunming, China. xingxiqian@ynu.edu.cn.
Yunnan University · CN

Funding

Famous Doctors of High-level Talent Training Support Program of Yunnan Province No. YNWR-MY-2020-013Science Research Foundation of Yunnan Provincial Education Department 2022J0019the National Natural Science Foundation of China No. 82160016the Special and Joint Program of the Yunnan Provincial Science and Technology Department and Kunming Medical University 202201AY070001-265the Special and Joint Program of the Yunnan Provincial Science and Technology Department and Kunming Medical University 202201AY070001-277
6 · The paper itself

Abstract

backgroundTo study the role of microecology and metabolism in iatrogenic tracheal injury and cicatricial stenosis, we investigated the tracheal microbiome and metabolome in patients with tracheal stenosis after endotracheal intubation.

methodsWe collected 16 protected specimen brush (PSB) and 8 broncho-alveolar lavage (BAL) samples from 8 iatrogenic subglottic tracheal stenosis patients, including 8 PSB samples from tracheal scar sites, 8 PSB samples from scar-free sites and 8 BAL samples, by lavaging the subsegmental bronchi of the right-middle lobe. Metagenomic sequencing was performed to characterize the microbiome profiling of 16 PSB and 8 BAL samples. Untargeted metabolomics was performed in 6 PSB samples (3 from tracheal scar PSB and 3 from tracheal scar-free PSB) using high-performance liquid chromatography‒mass spectrometry (LC‒MS).

resultsAt the species level, the top four bacterial species were Neisseria subflava, Streptococcus oralis, Capnocytophaga gingivals, and Haemophilus aegyptius. The alpha and beta diversity among tracheal scar PSB, scar-free PSB and BAL samples were compared, and no significant differences were found. Untargeted metabolomics was performed in 6 PSB samples using LC‒MS, and only one statistically significant metabolite, carnitine, was identified. Pathway enrichment analysis of carnitine revealed significant enrichment in fatty acid oxidation.

conclusionOur study found that carnitine levels in tracheal scar tissue were significantly lower than those in scar-free tissue, which might be a new target for the prevention and treatment of iatrogenic tracheal stenosis in the future.

Indexed as

LaryngostenosisMicrobiotaTracheal StenosisCarnitineCicatrixHumansIatrogenic DiseaseMetabolomeCarnitineMetabolomeSubglottic tracheal stenosisTracheal microbiome

Identifiers

PMID37752498
PMCPMC10523634
OpenAlexW4387059905

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.