Evidence map›Paper›PMID 37752439›Full record

ArticleBMC immunology2023

Development and validation of a machine learning-based nomogram for predicting HLA-B27 expression.

Jichong Zhu, Weiming Tan, Xinli Zhan, Qing Lu, Tuo Liang, JieJiang, Hao Li, Chenxing Zhou, Shaofeng Wu, Tianyou Chen and 5 more

Open access · goldAbstract read
In one paragraph

Article in BMC immunology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.7field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 1 institution in 1 country.

Jichong Zhu *The First Affiliated Hospital of Guangxi Medical University, Nanning, 530021, P. R. China.
Weiming Tan *The First Affiliated Hospital of Guangxi Medical University, Nanning, 530021, P. R. China.
Xinli ZhanThe First Affiliated Hospital of Guangxi Medical University, Nanning, 530021, P. R. China.
Qing LuThe First Affiliated Hospital of Guangxi Medical University, Nanning, 530021, P. R. China.
Tuo LiangThe First Affiliated Hospital of Guangxi Medical University, Nanning, 530021, P. R. China.
JieJiangThe First Affiliated Hospital of Guangxi Medical University, Nanning, 530021, P. R. China.
Hao LiThe First Affiliated Hospital of Guangxi Medical University, Nanning, 530021, P. R. China.
Chenxing ZhouThe First Affiliated Hospital of Guangxi Medical University, Nanning, 530021, P. R. China.
Shaofeng WuThe First Affiliated Hospital of Guangxi Medical University, Nanning, 530021, P. R. China.
Tianyou ChenThe First Affiliated Hospital of Guangxi Medical University, Nanning, 530021, P. R. China.
Yuanlin YaoThe First Affiliated Hospital of Guangxi Medical University, Nanning, 530021, P. R. China.
Shian LiaoThe First Affiliated Hospital of Guangxi Medical University, Nanning, 530021, P. R. China.
Chaojie YuThe First Affiliated Hospital of Guangxi Medical University, Nanning, 530021, P. R. China.
Liyi ChenThe First Affiliated Hospital of Guangxi Medical University, Nanning, 530021, P. R. China.
Chong LiuThe First Affiliated Hospital of Guangxi Medical University, Nanning, 530021, P. R. China. liuchong@stu.gxmu.edu.cn.
Guangxi Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHLA-B27 positivity is normal in patients undergoing rheumatic diseases. The diagnosis of many diseases requires an HLA-B27 examination.

methodsThis study screened totally 1503 patients who underwent HLA-B27 examination, liver/kidney function tests, and complete blood routine examination in First Affiliated Hospital of Guangxi Medical University. The training cohort included 509 cases with HLA-B27 positivity whereas 611 with HLA-B27 negativity. In addition, validation cohort included 147 cases with HLA-B27 positivity whereas 236 with HLA-B27 negativity. In this study, 3 ML approaches, namely, LASSO, support vector machine (SVM) recursive feature elimination and random forest, were adopted for screening feature variables. Subsequently, to acquire the prediction model, the intersection was selected. Finally, differences among 148 cases with HLA-B27 positivity and negativity suffering from ankylosing spondylitis (AS) were investigated.

resultsSix factors, namely red blood cell count, human major compatibility complex, mean platelet volume, albumin/globulin ratio (ALB/GLB), prealbumin, and bicarbonate radical, were chosen with the aim of constructing the diagnostic nomogram using ML methods. For training queue, nomogram curve exhibited the value of area under the curve (AUC) of 0.8254496, and C-value of the model was 0.825. Moreover, nomogram C-value of the validation queue was 0.853, and the AUC value was 0.852675. Furthermore, a significant decrease in the ALB/GLB was noted among cases with HLA-B27 positivity and AS cases.

conclusionTo conclude, the proposed ML model can effectively predict HLA-B27 and help doctors in the diagnosis of various immune diseases.

Indexed as

HLA-B27 AntigenNomogramsChinaHumansLiverMachine LearningHLA-B27 AntigenHLA-B27Immunological diseasesMachine learning algorithmsNomogramPrediction model

Identifiers

PMID37752439
PMCPMC10521518
OpenAlexW4387059637

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.