Evidence map›Paper›PMID 37752213›Full record

ArticleJournal of human genetics2023

Novel CWF19L1 mutations in patients with spinocerebellar ataxia, autosomal recessive 17.

Prashant Phulpagar, Vikram V Holla, Deepti Tomar, Nitish Kamble, Ravi Yadav, Pramod Kumar Pal, Babylakshmi Muthusamy

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Article in Journal of human genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.1field-weighted citation impact, top 52% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Prashant Phulpagar *Institute of Bioinformatics, International Technology Park, Bangalore, 560066, India.ORCID http://orcid.org/0000-0002-0982-8192
Vikram V Holla *Department of Neurology, NIMHANS, Hosur Road, Bangalore, 560029, India.
Deepti TomarInstitute of Bioinformatics, International Technology Park, Bangalore, 560066, India.
Nitish KambleDepartment of Neurology, NIMHANS, Hosur Road, Bangalore, 560029, India.
Ravi YadavDepartment of Neurology, NIMHANS, Hosur Road, Bangalore, 560029, India.
Pramod Kumar PalDepartment of Neurology, NIMHANS, Hosur Road, Bangalore, 560029, India. palpramod@hotmail.com.
Babylakshmi MuthusamyInstitute of Bioinformatics, International Technology Park, Bangalore, 560066, India. babylakshmi@ibioinformatics.org.ORCID http://orcid.org/0000-0002-2257-3630
National Institute of Mental Health and Neurosciences · INManipal Academy of Higher Education · INInstitute of Bioinformatics · IN

Funding

DST | Science and Engineering Research Board (SERB) EMR/2017/004853
6 · The paper itself

Abstract

Spinocerebellar ataxia, autosomal recessive-17 (SCAR17) is a rare hereditary ataxia characterized by ataxic gait, cerebellar signs and occasionally accompanied by intellectual disability and seizures. Pathogenic mutations in the CWF19L1 gene that code for CWF19 like cell cycle control factor 1 cause SCAR17. We report here two unrelated families with the clinical characteristics of global developmental delay, cerebellar ataxia, pyramidal signs, and seizures. Cerebellar atrophy, and T2/FLAIR hypointense transverse pontine stripes were observed in brain imaging. Exome sequencing identified novel homozygous mutations including a splice acceptor site variant c.1375-2 A > G on intron 12 in a male patient and a single nucleotide variant c.452 T > G on exon 5 resulting in a missense variant p.Ile151Ser in the female patient from two unrelated families, respectively. Sanger sequencing confirmed the segregation of these variants in the family members with autosomal recessive inheritance. Transcript analysis of the splice site variant revealed activation of a novel cryptic splice acceptor site on exon 13 resulting in an alternative transcription with a loss of nine nucleotides on exon 13. Translation of this transcript predicted an in-frame deletion of three amino acids p.(459_461del). We also observed a novel exon 13 skipping which results in premature termination of the protein product. Our study expands the phenotype, radiological features, and genotypes known in SCAR17.

Indexed as

Cerebellar AtaxiaSpinocerebellar AtaxiasCell Cycle ProteinsFemaleHumansMaleMutationPedigreeRNA Splice SitesSeizuresCell Cycle ProteinsCWF19L1 protein, humanRNA Splice Sites

Identifiers

PMID37752213
OpenAlexW4387055528

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.