Evidence map›Paper›PMID 37751215›Full record

ArticleThe British journal of radiology2023

Automated classification of fat-infiltrated axillary lymph nodes on screening mammograms.

Qingyuan Song, Roberta M diFlorio-Alexander, Ryan T Sieberg, Dennis Dwan, William Boyce, Kyle Stumetz, Sohum D Patel, Margaret R Karagas, Todd A MacKenzie, Saeed Hassanpour

Open access · hybridAbstract read
In one paragraph

Article in The British journal of radiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.3field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Qingyuan SongDepartment of Biomedical Data Science, Geisel School of Medicine, Dartmouth College, Lebanon, New Hampshire, United States.
Roberta M diFlorio-AlexanderDepartment of Radiology, Dartmouth-Hitchcock Medical Center, Lebanon, New Hampshire, United States.
Ryan T SiebergDepartment of Radiology, School of Medicine, University of California, San Francisco, California, United States.
Dennis DwanDepartment of Internal Medicine, Carney Hospital, Dorchester, Massachusetts, United States.
William BoyceGeisel School of Medicine, Dartmouth College, Lebanon, New Hampshire, United States.
Kyle StumetzDepartment of Radiology, Dartmouth-Hitchcock Medical Center, Lebanon, New Hampshire, United States.
Sohum D PatelDepartment of Radiology, Dartmouth-Hitchcock Medical Center, Lebanon, New Hampshire, United States.
Margaret R KaragasDepartment of Epidemiology, Geisel School of Medicine, Dartmouth College, Lebanon, New Hampshire, United States.
Todd A MacKenzieDepartment of Biomedical Data Science, Geisel School of Medicine, Dartmouth College, Lebanon, New Hampshire, United States.
Saeed HassanpourDepartment of Biomedical Data Science, Geisel School of Medicine, Dartmouth College, Lebanon, New Hampshire, United States.
Dartmouth College · USDartmouth–Hitchcock Medical Center · USCarney Hospital · USUniversity of California, San Francisco · US

Funding

Translational Engineering in Cancer (TEC)P30CA023108 · NCI · DARTMOUTH COLLEGE · PI Steven D Leach · 1985 to 2026
$91.3M
Relation Between In-utero Vitamin D and Immune Function in Early Childhood P20GM104416 · NIGMS · DARTMOUTH COLLEGE · PI CHRISTENSEN, BROCK CLARKE · 2013 to 2022
$23.7M
Advancing Digital Pathology through Novel Machine Learning MethodologiesR01LM013833 · NLM · DARTMOUTH COLLEGE · PI Saeed Hassanpour · 2022 to 2026
$3.0M
Clinicopathologic and Genetic Profiling through Machine Learning and Natural Language Processing for Precision Lung Cancer ManagementR01CA249758 · NCI · DARTMOUTH COLLEGE · PI HASSANPOUR, SAEED · 2019 to 2022
$1.5M
Improving Colorectal Cancer Screening and Risk Assessment through Deep Learning on Medical Images and RecordsR01LM012837 · NLM · DARTMOUTH COLLEGE · PI HASSANPOUR, SAEED · 2019 to 2022
$1.4M
NCI NIH HHS P30 CA023108NCI NIH HHS R01 CA249758NIGMS NIH HHS P20 GM104416NLM NIH HHS R01 LM012837NLM NIH HHS R01 LM013833
6 · The paper itself

Abstract

objectiveFat-infiltrated axillary lymph nodes (LNs) are unique sites for ectopic fat deposition. Early studies showed a strong correlation between fatty LNs and obesity-related diseases. Confirming this correlation requires large-scale studies, hindered by scarce labeled data. With the long-term goal of developing a rapid and generalizable tool to aid data labeling, we developed an automated deep learning (DL)-based pipeline to classify the status of fatty LNs on screening mammograms.

methodsOur internal data set included 886 mammograms from a tertiary academic medical institution, with a binary status of the fat-infiltrated LNs based on the size and morphology of the largest visible axillary LN. A two-stage DL model training and fine-tuning pipeline was developed to classify the fat-infiltrated LN status using the internal training and development data set. The model was evaluated on a held-out internal test set and a subset of the Digital Database for Screening Mammography.

resultsOur model achieved 0.97 (95% CI: 0.94-0.99) accuracy and 1.00 (95% CI: 1.00-1.00) area under the receiver operator characteristic curve on 264 internal testing mammograms, and 0.82 (95% CI: 0.77-0.86) accuracy and 0.87 (95% CI: 0.82-0.91) area under the receiver operator characteristic curve on 70 external testing mammograms.

conclusionThis study confirmed the feasibility of using a DL model for fat-infiltrated LN classification. The model provides a practical tool to identify fatty LNs on mammograms and to allow for future large-scale studies to evaluate the role of fatty LNs as an imaging biomarker of obesity-associated pathologies. ADVANCES IN KNOWLEDGE: Our study is the first to classify fatty LNs using an automated DL approach.

Indexed as

Breast NeoplasmsMammographyEarly Detection of CancerFemaleHumansLymph NodesObesity

Identifiers

PMID37751215
PMCPMC10607412
OpenAlexW4387032798

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.