Evidence map›Paper›PMID 37749333›Full record

ArticleInsights into imaging2023

Label-set impact on deep learning-based prostate segmentation on MRI.

Jakob Meglič, Mohammed R S Sunoqrot, Tone Frost Bathen, Mattijs Elschot

Abstract read
In one paragraph

Article in Insights into imaging, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jakob MegličDepartment of Circulation and Medical Imaging, Norwegian University of Science and Technology - NTNU, 7030, Trondheim, Norway. jakobmeg@stud.ntnu.no.ORCID http://orcid.org/0000-0003-1686-8165
Mohammed R S SunoqrotDepartment of Circulation and Medical Imaging, Norwegian University of Science and Technology - NTNU, 7030, Trondheim, Norway.
Tone Frost BathenDepartment of Circulation and Medical Imaging, Norwegian University of Science and Technology - NTNU, 7030, Trondheim, Norway.
Mattijs ElschotDepartment of Circulation and Medical Imaging, Norwegian University of Science and Technology - NTNU, 7030, Trondheim, Norway. mattijs.elschot@ntnu.no.

Funding

Liaison Committee between the Central Norway Regional Health Authority and the Norwegian University of Science and Technology 90265300Liaison Committee between the Central Norway Regional Health Authority and the Norwegian University of Science and Technology 982992100Norges Forskningsråd 295013Norwegian Cancer Society and Prostatakreftforeningen 215951
6 · The paper itself

Abstract

backgroundProstate segmentation is an essential step in computer-aided detection and diagnosis systems for prostate cancer. Deep learning (DL)-based methods provide good performance for prostate gland and zones segmentation, but little is known about the impact of manual segmentation (that is, label) selection on their performance. In this work, we investigated these effects by obtaining two different expert label-sets for the PROSTATEx I challenge training dataset (n = 198) and using them, in addition to an in-house dataset (n = 233), to assess the effect on segmentation performance. The automatic segmentation method we used was nnU-Net.

resultsThe selection of training/testing label-set had a significant (p < 0.001) impact on model performance. Furthermore, it was found that model performance was significantly (p < 0.001) higher when the model was trained and tested with the same label-set. Moreover, the results showed that agreement between automatic segmentations was significantly (p < 0.0001) higher than agreement between manual segmentations and that the models were able to outperform the human label-sets used to train them.

conclusionsWe investigated the impact of label-set selection on the performance of a DL-based prostate segmentation model. We found that the use of different sets of manual prostate gland and zone segmentations has a measurable impact on model performance. Nevertheless, DL-based segmentation appeared to have a greater inter-reader agreement than manual segmentation. More thought should be given to the label-set, with a focus on multicenter manual segmentation and agreement on common procedures. CRITICAL RELEVANCE STATEMENT: Label-set selection significantly impacts the performance of a deep learning-based prostate segmentation model. Models using different label-set showed higher agreement than manual segmentations. KEY POINTS: • Label-set selection has a significant impact on the performance of automatic segmentation models. • Deep learning-based models demonstrated true learning rather than simply mimicking the label-set. • Automatic segmentation appears to have a greater inter-reader agreement than manual segmentation.

Indexed as

Deep learningLabelMRIProstateSegmentation

Identifiers

PMID37749333
PMCPMC10519913

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.