Evidence map›Paper›PMID 37747887›Full record

ArticlePLoS biology2023

The transcription factor DUX4 orchestrates translational reprogramming by broadly suppressing translation efficiency and promoting expression of DUX4-induced mRNAs.

Danielle C Hamm, Ellen M Paatela, Sean R Bennett, Chao-Jen Wong, Amy E Campbell, Cynthia L Wladyka, Andrew A Smith, Sujatha Jagannathan, Andrew C Hsieh, Stephen J Tapscott

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Danielle C HammHuman Biology Division, Fred Hutchinson Cancer Center, Seattle, Washington State, United States of America.ORCID 0000-0003-2966-7389
Ellen M PaatelaHuman Biology Division, Fred Hutchinson Cancer Center, Seattle, Washington State, United States of America.
Sean R BennettHuman Biology Division, Fred Hutchinson Cancer Center, Seattle, Washington State, United States of America.
Chao-Jen WongHuman Biology Division, Fred Hutchinson Cancer Center, Seattle, Washington State, United States of America.
Amy E CampbellDepartment of Biochemistry and Molecular Genetics, University of Colorado Anschutz Medical Campus, Aurora, Colorado, United States of America.
Cynthia L WladykaHuman Biology Division, Fred Hutchinson Cancer Center, Seattle, Washington State, United States of America.
Andrew A SmithHuman Biology Division, Fred Hutchinson Cancer Center, Seattle, Washington State, United States of America.
Sujatha JagannathanDepartment of Biochemistry and Molecular Genetics, University of Colorado Anschutz Medical Campus, Aurora, Colorado, United States of America.
Andrew C HsiehHuman Biology Division, Fred Hutchinson Cancer Center, Seattle, Washington State, United States of America.
Stephen J TapscottHuman Biology Division, Fred Hutchinson Cancer Center, Seattle, Washington State, United States of America.ORCID 0000-0002-0319-0968
Fred Hutch Cancer Center · USUniversity of Washington · USUniversity of Colorado Anschutz Medical Campus · US

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Eric Collisson · 1985 to 2026
$296.4M
Wellstone Muscular Dystrophy Specialized Research Center (Seattle)P50AR065139 · NIAMS · UNIVERSITY OF WASHINGTON · PI MICHAEL REGNIER · 2018 to 2026
$15.9M
MYOTONIC DYSTROPHY LOCUS CONTROLR01AR045203 · NIAMS · FRED HUTCHINSON CANCER RESEARCH CENTER · PI TAPSCOTT, STEPHEN J · 1998 to 2025
$9.4M
Hormone signaling and translation control in advanced prostate cancerR37CA230617 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI HSIEH, ANDREW CALEB · 2019 to 2025
$3.1M
Transcriptional-translational conflict in bladder epithelial homeostasis and cancerR01CA276308 · NCI · FRED HUTCHINSON CANCER CENTER · PI Andrew Caleb Hsieh · 2023 to 2026
$2.3M
Selective mRNA translation in developmental disordersR01GM135362 · NIGMS · FRED HUTCHINSON CANCER RESEARCH CENTER · PI BERONJA, SLOBODAN, HSIEH, ANDREW CALEB · 2020 to 2023
$2.1M
Reactivation of an early embryonic program in FSHD and cancerF32CA254805 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI HAMM, DANIELLE · 2020 to 2023
$204k
NCI NIH HHS F32 CA254805NCI NIH HHS P30 CA015704NCI NIH HHS R01 CA276308NCI NIH HHS R37 CA230617NIAMS NIH HHS P50 AR065139NIAMS NIH HHS R01 AR045203NIGMS NIH HHS R01 GM135362
6 · The paper itself

Abstract

Translational control is critical for cell fate transitions during development, lineage specification, and tumorigenesis. Here, we show that the transcription factor double homeobox protein 4 (DUX4), and its previously characterized transcriptional program, broadly regulates translation to change the cellular proteome. DUX4 is a key regulator of zygotic genome activation in human embryos, whereas misexpression of DUX4 causes facioscapulohumeral muscular dystrophy (FSHD) and is associated with MHC-I suppression and immune evasion in cancer. We report that translation initiation and elongation factors are disrupted downstream of DUX4 expression in human myoblasts. Genome-wide translation profiling identified mRNAs susceptible to DUX4-induced translation inhibition, including those encoding antigen presentation factors and muscle lineage proteins, while DUX4-induced mRNAs were robustly translated. Endogenous expression of DUX4 in human FSHD myotubes and cancer cell lines also correlated with reduced protein synthesis and MHC-I presentation. Our findings reveal that DUX4 orchestrates cell state conversion by suppressing the cellular proteome while maintaining translation of DUX4-induced mRNAs to promote an early developmental program.

Indexed as

Homeodomain ProteinsMuscular Dystrophy, FacioscapulohumeralTranscription FactorsHumansMuscle, SkeletalProteomeRNA, MessengerDUX4L1 protein, humanHomeodomain ProteinsProteomeRNA, MessengerTranscription Factors

Identifiers

PMID37747887
PMCPMC10553841
OpenAlexW4387014571

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.