Evidence map›Paper›PMID 37747532›Full record

ArticleBiochemical genetics2024

Back to Old Books Toward Affordable Research: Homemade Phenol-Based Reagent for Triphasic RNA Purification.

Mahmoud M Abdelfattah, Yasmine Hosny, Nadia A Elkady, Eslam M Abbas, Iman G Farahat, Nagwa H A Hassan, Reham Helwa

Abstract read
In one paragraph

Article in Biochemical genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Mahmoud M AbdelfattahMolecular Cancer Biology Group, Zoology Department, Faculty of Science, Ain Shams University, Cairo, Egypt.
Yasmine HosnyVertebrate Biology Group, Zoology Department, Faculty of Science, Ain Shams University, Cairo, Egypt.
Nadia A ElkadyDepartment of Microbiology, Faculty of Science, Ain Shams University, Cairo, Egypt.
Eslam M AbbasDepartment of Chemistry, Faculty of Science, Ain Shams University, Cairo, Egypt.
Iman G FarahatDepartment of Pathology- National Cancer Institute, Cairo University, Cairo, Egypt.
Nagwa H A HassanMolecular Cancer Biology Group, Zoology Department, Faculty of Science, Ain Shams University, Cairo, Egypt.
Reham HelwaMolecular Cancer Biology Group, Zoology Department, Faculty of Science, Ain Shams University, Cairo, Egypt. Reham.helwa@sci.asu.edu.eg.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Covid-19 crisis did hit many socio-economic aspects in the whole world. In the scientific research, the problem is getting even worse, since most of materials and consumable are allocated to the health sector. Many research laboratories around the world have big delay in receiving their purchases to accomplish their research projects. In the developing countries, the situation is much more difficult, since most of the funding resources are directed to the Covid-19 crisis and there is a notable increase in reagents' prices. Therefore, the aim of the present study is to make a homemade reagents for RNA purification from eukaryotic cells/tissues. The homemade phenol-based RNA extraction reagents were prepared using saturated phenol pH 4.3 (adjusted by 0.5 M citrate buffer) and guanidine thiocyanate. To validate the phenol-based reagent, RNA was purified from different biological samples (cell line, tissues, and fungi) using homemade phenol-based versus a commercial one. Concentration of RNA samples extracted from the same number of cells were compared to assess the homemade preparation of phenol-based reagent. In conclusion, homemade phenol-based reagent is cost effective and comparable to the commercial one. Using homemade phenol-based, RNA extraction was successfully purified from different biological sources.

Indexed as

PhenolAnimalsCOVID-19GuanidinesHumansIndicators and ReagentsRNARNA, ViralSARS-CoV-2ThiocyanatesGuanidinesguanidine thiocyanateIndicators and ReagentsPhenolRNARNA, ViralThiocyanatesAcidic phenolEukaryotic cellsHomemade purificationPhenol-based reagentRNA

Identifiers

PMID37747532
PMCPMC11186942

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.