Evidence map›Paper›PMID 37744332›Full record

ArticleFrontiers in immunology2023

Use of high-plex data provides novel insights into the temporal artery processes of giant cell arteritis.

Simon Parreau, Elsa Molina, Stéphanie Dumonteil, Radjiv Goulabchand, Thomas Naves, Melanie C Bois, Hussein Akil, Faraj Terro, Anne-Laure Fauchais, Eric Liozon and 3 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 7 institutions in 2 countries.

Simon ParreauDivision of Rheumatology, Mayo Clinic, Rochester, MN, United States.
Elsa MolinaStem Cell Genomics Core, Stem Cell Program, University of California, San Diego, La Jolla, CA, United States.
Stéphanie DumonteilDivision of Internal Medicine, Dupuytren University Hospital, Limoges, France.
Radjiv GoulabchandDivision of Internal Medicine, Nîmes University Hospital, University of Montpellier, Nîmes, France.
Thomas NavesINSERM U1308, Faculty of Medicine, University of Limoges, Limoges, France.
Melanie C BoisDivision of Laboratory Medicine and Pathology, Mayo Clinic, Rochester, MN, United States.
Hussein AkilINSERM U1308, Faculty of Medicine, University of Limoges, Limoges, France.
Faraj TerroCell Biology, Dupuytren University Hospital, Limoges, France.
Anne-Laure FauchaisDivision of Internal Medicine, Dupuytren University Hospital, Limoges, France.
Eric LiozonDivision of Internal Medicine, Dupuytren University Hospital, Limoges, France.
Marie-Odile JauberteauINSERM U1308, Faculty of Medicine, University of Limoges, Limoges, France.
Cornelia M WeyandDivision of Rheumatology, Mayo Clinic, Rochester, MN, United States.
Kim-Heang LyDivision of Internal Medicine, Dupuytren University Hospital, Limoges, France.
Hôpital Dupuytren · FRInserm · FRUniversité de Limoges · FRMayo Clinic · USMayo Clinic in Arizona · USSalk Institute for Biological Studies · USUniversité de Montpellier · FR

Funding

The NOTCH Signaling Pathway in Large Vessel VasculitisR01HL117913 · NHLBI · STANFORD UNIVERSITY · PI WEYAND, CORNELIA M. · 2014 to 2025
$5.0M
Oligoclonal T Cell Expansion &Rheumatoid ArthritisR01AR042527 · NIAMS · STANFORD UNIVERSITY · PI WEYAND, CORNELIA M. · 1993 to 2022
$4.8M
Telomere Damage Responses and Immune AgingR01AI108906 · NIAID · STANFORD UNIVERSITY · PI WEYAND, CORNELIA M. · 2014 to 2024
$4.0M
T Cell Immunity in Giant Cell ArteritisR01HL142068 · NHLBI · STANFORD UNIVERSITY · PI Cornelia M. Weyand · 2018 to 2026
$3.3M
NHLBI NIH HHS R01 HL117913NHLBI NIH HHS R01 HL142068NIAID NIH HHS R01 AI108906NIAMS NIH HHS R01 AR042527
6 · The paper itself

Abstract

Objective: To identify the key coding genes underlying the biomarkers and pathways associated with giant cell arteritis (GCA), we performed an Methods: Using human formalin-fixed paraffin-embedded temporal artery biopsy samples (GCA, n = 9; controls, n = 7), we performed a whole transcriptome analysis using the NanoString GeoMx Digital Spatial Profiler. In total, 59 regions of interest were selected in the intima, media, adventitia, and perivascular adipose tissue (PVAT). Differentially expressed genes (DEGs) (fold-change > 2 or < -2, p-adjusted < 0.01) were compared across each layer to build a spatial and pharmacogenomic network and to explore the pathophysiological mechanisms of GCA. Results: Most of the transcriptome (12,076 genes) was upregulated in GCA arteries, compared to control arteries. Among the screened genes, 282, 227, 40, and 5 DEGs were identified in the intima, media, adventitia, and PVAT, respectively. Genes involved in the immune process and vascular remodeling were upregulated within GCA temporal arteries but differed across the arterial layers. The immune-related functions and vascular remodeling were limited to the intima and media. Conclusion: This study is the first to perform an

Indexed as

Giant Cell ArteritisArteriesBiomarkersHumansTemporal ArteriesVascular RemodelingBiomarkersgene expressiongiant cell arteritistemporal artery biopsytranscriptomic analysisvasculitis

Identifiers

PMID37744332
PMCPMC10512077
OpenAlexW4386471020

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.