Evidence map›Paper›PMID 37744138›Full record

ArticleFrontiers in fungal biology2021

Interspecies Genomic Variation and Transcriptional Activeness of Secondary Metabolism-Related Genes in

Hiroki Takahashi, Maiko Umemura, Akihiro Ninomiya, Yoko Kusuya, Masaaki Shimizu, Syun-Ichi Urayama, Akira Watanabe, Katsuhiko Kamei, Takashi Yaguchi, Daisuke Hagiwara

Abstract read
In one paragraph

Article in Frontiers in fungal biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. The terrein biosynthetic gene cluster ofFrontiers in fungal biology · 2025
    Review
  2. Genomic insights intoFrontiers in microbiology · 2023
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Hiroki TakahashiMedical Mycology Research Center, Chiba University, Chiba, Japan.
Maiko UmemuraBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Japan.
Akihiro NinomiyaFaculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Japan.
Yoko KusuyaMedical Mycology Research Center, Chiba University, Chiba, Japan.
Masaaki ShimizuDepartment of Biology, Faculty of Science, Chiba University, Chiba, Japan.
Syun-Ichi UrayamaFaculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Japan.
Akira WatanabeMedical Mycology Research Center, Chiba University, Chiba, Japan.
Katsuhiko KameiMedical Mycology Research Center, Chiba University, Chiba, Japan.
Takashi YaguchiMedical Mycology Research Center, Chiba University, Chiba, Japan.
Daisuke HagiwaraMedical Mycology Research Center, Chiba University, Chiba, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Filamentous fungi produce various bioactive compounds that are biosynthesized by sets of proteins encoded in biosynthesis gene clusters (BGCs). For an unknown reason, many BGCs are transcriptionally silent in laboratory conditions, which has hampered the discovery of novel fungal compounds. The transcriptional reactiveness of fungal secondary metabolism is not fully understood. To gain the comprehensive view, we conducted comparative genomic and transcriptomic analyses of nine closely-related species of

Indexed as

Aspergillus fumigatusAspergillus section Fumigaticomparative genomic analysiscomparative transcriptomic analysisgliotoxinsecondary metabolic geneterreinviriditoxin

Identifiers

PMID37744138
PMCPMC10512231

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.