Evidence map›Paper›PMID 37744137›Full record

ArticleFrontiers in fungal biology2021

Testing the Genomic Shock Hypothesis Using Transposable Element Expression in Yeast Hybrids.

Marika Drouin, Mathieu Hénault, Johan Hallin, Christian R Landry

Abstract read
In one paragraph

Article in Frontiers in fungal biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. The repeatome landscape in the "Frontiers in plant science · 2026
    Article
  2. Article
  3. Article
  4. Review
  5. Recent insights into the evolution of mutation rates in yeast.Current opinion in genetics & development · 2022
    Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Marika DrouinInstitut de Biologie Intégrative et des Systèmes, Université Laval, Québec, QC, Canada.
Mathieu HénaultInstitut de Biologie Intégrative et des Systèmes, Université Laval, Québec, QC, Canada.
Johan HallinInstitut de Biologie Intégrative et des Systèmes, Université Laval, Québec, QC, Canada.
Christian R LandryInstitut de Biologie Intégrative et des Systèmes, Université Laval, Québec, QC, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transposable element (TE) insertions are a source of structural variation and can cause genetic instability and gene expression changes. A host can limit the spread of TEs with various repression mechanisms. Many examples of plant and animal interspecific hybrids show disrupted TE repression leading to TE propagation. Recent studies in yeast did not find any increase in transposition rate in hybrids. However, this does not rule out the possibility that the transcriptional or translational activity of TEs increases following hybridization because of a disruption of the host TE control mechanisms. Thus, whether total expression of a TE family is higher in hybrids than in their parental species remains to be examined. We leveraged publically available RNA-seq and ribosomal profiling data on yeast artificial hybrids of the

Indexed as

differential expression analysisgenomic shockhybridizationretrotransposonRNA sequencingtransposable elementyeast

Identifiers

PMID37744137
PMCPMC10512236

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.