Evidence map›Paper›PMID 37743569›Full record

ArticleProtein science : a publication of the Protein Society2023

The variable domain from dynamin-related protein 1 promotes liquid-liquid phase separation that enhances its interaction with cardiolipin-containing membranes.

Ammon E Posey, Kyle A Ross, Mehran Bagheri, Elizabeth N Lanum, Misha A Khan, Christine E Jennings, Megan C Harwig, Nolan W Kennedy, Vincent J Hilser, James L Harden and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Review
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  5. Article
  6. Biomolecular condensates and disease pathogenesis.Science China. Life sciences · 2024
    Review
  7. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Ammon E PoseyProgram in Molecular Biophysics, Johns Hopkins University, Baltimore, Maryland, USA.
Kyle A RossDepartment of Biochemistry, Medical College of Wisconsin, Milwaukee, Wisconsin, USA.
Mehran BagheriDepartment of Physics, University of Ottawa, Ottawa, Ontario, USA.
Elizabeth N LanumDepartment of Biochemistry, Medical College of Wisconsin, Milwaukee, Wisconsin, USA.
Misha A KhanDepartment of Biochemistry, Medical College of Wisconsin, Milwaukee, Wisconsin, USA.
Christine E JenningsDepartment of Biochemistry, Medical College of Wisconsin, Milwaukee, Wisconsin, USA.
Megan C HarwigDepartment of Biochemistry, Medical College of Wisconsin, Milwaukee, Wisconsin, USA.
Nolan W KennedyDepartment of Biochemistry, Medical College of Wisconsin, Milwaukee, Wisconsin, USA.
Vincent J HilserProgram in Molecular Biophysics, Johns Hopkins University, Baltimore, Maryland, USA.
James L HardenDepartment of Physics, University of Ottawa, Ottawa, Ontario, USA.
R Blake HillDepartment of Biochemistry, Medical College of Wisconsin, Milwaukee, Wisconsin, USA.ORCID 0000-0001-6228-3905
Medical College of Wisconsin · USJohns Hopkins University · USUniversity of Ottawa · CA

Funding

Thermodynamics of Protein FluctuationsR01GM063747 · NIGMS · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI HILSER, VINCENT J. · 2001 to 2023
$7.9M
Structural Biology of Mitochondrial FissionR01GM067180 · NIGMS · MEDICAL COLLEGE OF WISCONSIN · PI HILL, R BLAKE · 2004 to 2022
$6.0M
800 MHz NMR Spectrometer for Southeast WisconsinS10OD025000 · OD · MEDICAL COLLEGE OF WISCONSIN · PI VOLKMAN, BRIAN F · 2019 to 2019
$2.0M
An Automated Microscale Thermophoresis Instrument for Southeastern Wisconsin: a Shared Resource for Biomolecular Interactions and Drug DiscoveryS10OD025036 · OD · MEDICAL COLLEGE OF WISCONSIN · PI HILL, R BLAKE · 2019 to 2019
$582k
600 MHZ NMR SPECTROMETER FOR SHARED USE: MOLECULAR BIOLOGYS10RR020922 · NCRR · JOHNS HOPKINS UNIVERSITY · PI HILL, R BLAKE · 2005 to 2005
$500k
NCRR NIH HHS S10 RR020922NIGMS NIH HHS R01 GM063747NIGMS NIH HHS R01 GM067180NIH HHS R01-GM067180NIH HHS S10 OD025000NIH HHS S10 OD025036
6 · The paper itself

Abstract

Dynamins are an essential superfamily of mechanoenzymes that remodel membranes and often contain a "variable domain" important for regulation. For the mitochondrial fission dynamin, dynamin-related protein 1, a regulatory role for the variable domain (VD) is demonstrated by gain- and loss-of-function mutations, yet the basis for this is unclear. Here, the isolated VD is shown to be intrinsically disordered and undergo a cooperative transition in the stabilizing osmolyte trimethylamine N-oxide. However, the osmolyte-induced state is not folded and surprisingly appears as a condensed state. Other co-solutes including known molecular crowder Ficoll PM 70, also induce a condensed state. Fluorescence recovery after photobleaching experiments reveal this state to be liquid-like indicating the VD undergoes a liquid-liquid phase separation under crowding conditions. These crowding conditions also enhance binding to cardiolipin, a mitochondrial lipid, which appears to promote phase separation. Since dynamin-related protein 1 is found assembled into discrete punctate structures on the mitochondrial surface, the inference from the present work is that these structures might arise from a condensed state involving the VD that may enable rapid tuning of mechanoenzyme assembly necessary for fission.

Indexed as

CardiolipinsGTP PhosphohydrolasesDynaminsMitochondriaProtein Structure, TertiaryCardiolipinsDynaminsGTP Phosphohydrolasesdynaminfluorescenceintrinsically disordered proteinmitochondriamitochondrial fissionNMRphase separationprotein folding

Identifiers

PMID37743569
PMCPMC10578129
OpenAlexW4387001827

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.