Evidence map›Paper›PMID 37741866›Full record

ArticleScientific reports2023

Mechanosensitive ion channel gene survey suggests potential roles in primary open angle glaucoma.

Wendy W Liu, Tyler G Kinzy, Jessica N Cooke Bailey, Zihe Xu, Pirro Hysi, Janey L Wiggs, NEIGHBORHOOD Consortium

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
  2. Article
  3. Genome-Wide Association Study for Glucocorticoid-Induced Ocular Hypertension.medRxiv : the preprint server for health sciences · 2026
    Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Review
  10. Review
  11. Glaucoma-Protective Human Single-Nucleotide Polymorphism in theArteriosclerosis, thrombosis, and vascular biology · 2024
    Article
  12. Review
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 20 institutions in 2 countries.

Wendy W LiuSpencer Center for Vision Research, Byers Eye Institute, Stanford University School of Medicine, 2370 Watson Court, Palo Alto, CA, 94303, USA. wendywliu@stanford.edu.
Tyler G KinzyDepartment of Population and Quantitative Health Sciences, Cleveland Institute for Computational Biology, Case Western Reserve University, Cleveland, OH, USA.
Jessica N Cooke BaileyDepartment of Population and Quantitative Health Sciences, Cleveland Institute for Computational Biology, Case Western Reserve University, Cleveland, OH, USA.ORCID http://orcid.org/0000-0002-4001-8702
Zihe XuDepartment of Ophthalmology, King's College London, St. Thomas' Hospital, London, UK.
Pirro HysiDepartment of Ophthalmology, King's College London, St. Thomas' Hospital, London, UK.ORCID http://orcid.org/0000-0001-5752-2510
Janey L WiggsMassachusetts Eye and Ear, Harvard Medical School Boston, Boston, MA, USA.ORCID http://orcid.org/0000-0003-1890-3278
NEIGHBORHOOD Consortium
Case Western Reserve University · USStanford University · USUniversity of Miami · USUniversity of Michigan · USNew York University · USSt Thomas' Hospital · GBAugusta University · USDuke Medical Center · USDuke University · USIcahn School of Medicine at Mount Sinai · USJohns Hopkins University · USMarshfield Clinic · USMassachusetts Eye and Ear Infirmary · USMayo Clinic in Arizona · USNew York Eye and Ear Infirmary · USScripps Institution of Oceanography · USUniversity of California San Diego · USUniversity of Iowa · USUniversity of North Carolina at Chapel Hill · USUniversity School · US

Funding

P30 Core Grant for Vision ResearchP30EY014104 · NEI · MASSACHUSETTS EYE AND EAR INFIRMARY · PI Ayellet Vered Segre · 2002 to 2026
$15.1M
Institutional Career Development Core (KL2)KL2TR003143 · NCATS · STANFORD UNIVERSITY · PI ASCH, STEVEN M. · 2019 to 2023
$8.7M
Stanford Vision Research CoreP30EY026877 · NEI · STANFORD UNIVERSITY · PI Jeffrey L Goldberg · 2017 to 2026
$8.0M
The NEIGHBORHOOD: POAG Heritable Overall Operational DatabaseR01EY022305 · NEI · MASSACHUSETTS EYE AND EAR INFIRMARY · PI WIGGS, JANEY L · 2012 to 2025
$7.9M
Module 3: Gene Expression/ProteomicsP30EY031631 · NEI · AUGUSTA UNIVERSITY · PI Xingjun Fan · 2020 to 2026
$3.6M
Gene Discovery in Familial KeratoconusR01EY023242 · NEI · DUKE UNIVERSITY · PI LIU, YUTAO · 2013 to 2023
$3.4M
Estrogen and its Receptor in Intraocular Pressure RegulationR01EY032960 · NEI · MAYO CLINIC ROCHESTER · PI Yutao Liu · 2023 to 2026
$1.6M
The Role of Mechanosensitive Ion Channels in GlaucomaK08EY034600 · NEI · STANFORD UNIVERSITY · PI Wendy W. Liu · 2023 to 2026
$964k
Long Noncoding RNA lncLOXL1 and Exfoliation Syndrome.R21EY028671 · NEI · AUGUSTA UNIVERSITY · PI LIU, YUTAO · 2018 to 2019
$467k
MIR182 and Ocular Hypertension.R21EY033961 · NEI · AUGUSTA UNIVERSITY · PI LIU, YUTAO · 2023 to 2024
$424k
NCATS NIH HHS KL2 TR003143NEI NIH HHS K08 EY034600NEI NIH HHS P30 EY014104NEI NIH HHS P30 EY026877NEI NIH HHS P30 EY031631NEI NIH HHS R01 EY022305NEI NIH HHS R01 EY032960NEI NIH HHS R21 EY028671NEI NIH HHS R21 EY033961
6 · The paper itself

Abstract

Although glaucoma is a disease modulated by eye pressure, the mechanisms of pressure sensing in the eye are not well understood. Here, we investigated associations between mechanosensitive ion channel gene variants and primary open-angle glaucoma (POAG). Common (minor allele frequency > 5%) single nucleotide polymorphisms located within the genomic regions of 20 mechanosensitive ion channel genes in the K2P, TMEM63, PIEZO and TRP channel families were assessed using genotype data from the NEIGHBORHOOD consortium of 3853 cases and 33,480 controls. Rare (minor allele frequency < 1%) coding variants were assessed using exome array genotyping data for 2606 cases and 2606 controls. Association with POAG was analyzed using logistic regression adjusting for age and sex. Two rare PIEZO1 coding variants with protective effects were identified in the NEIGHBOR dataset: R1527H, (OR 0.17, P = 0.0018) and a variant that alters a canonical splice donor site, g.16-88737727-C-G Hg38 (OR 0.38, P = 0.02). Both variants showed similar effects in the UK Biobank and the R1527H also in the FinnGen database. Several common variants also reached study-specific thresholds for association in the NEIGHBORHOOD dataset. These results identify novel variants in several mechanosensitive channel genes that show associations with POAG, suggesting that these channels may be potential therapeutic targets.

Indexed as

Glaucoma, Open-AngleDatabases, FactualExomeGenotypeHumansIon ChannelsIon ChannelsPIEZO1 protein, human

Identifiers

PMID37741866
PMCPMC10517927
OpenAlexW4386980400

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.