Evidence map›Paper›PMID 37741833›Full record

ArticleScientific reports2023

MDF-Net for abnormality detection by fusing X-rays with clinical data.

Chihcheng Hsieh, Isabel Blanco Nobre, Sandra Costa Sousa, Chun Ouyang, Margot Brereton, Jacinto C Nascimento, Joaquim Jorge, Catarina Moreira

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 20 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Chihcheng HsiehQueensland University of Technology, Brisbane, Australia.
Isabel Blanco Nobre *Lusíadas Knowledge Center, Imageology Department, Lisbon, Portugal.
Sandra Costa Sousa *Lusíadas Knowledge Center, Imageology Department, Lisbon, Portugal.
Chun OuyangQueensland University of Technology, Brisbane, Australia.
Margot BreretonQueensland University of Technology, Brisbane, Australia.
Jacinto C NascimentoInstitute for Systems and Robotics, Instituto Superior Técnico, University of Lisbon, Lisbon, Portugal.
Joaquim JorgeInstituto Superior Técnico, University of Lisbon, Portugal, Lisbon, Portugal.
Catarina MoreiraQueensland University of Technology, Brisbane, Australia. catarina.pintomoreira@uts.edu.au.
Queensland University of Technology · AULusíada University of Lisbon · PTINESC TEC · PTUniversity of Lisbon · PT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study investigates the effects of including patients' clinical information on the performance of deep learning (DL) classifiers for disease location in chest X-ray images. Although current classifiers achieve high performance using chest X-ray images alone, consultations with practicing radiologists indicate that clinical data is highly informative and essential for interpreting medical images and making proper diagnoses. In this work, we propose a novel architecture consisting of two fusion methods that enable the model to simultaneously process patients' clinical data (structured data) and chest X-rays (image data). Since these data modalities are in different dimensional spaces, we propose a spatial arrangement strategy, spatialization, to facilitate the multimodal learning process in a Mask R-CNN model. We performed an extensive experimental evaluation using MIMIC-Eye, a dataset comprising different modalities: MIMIC-CXR (chest X-ray images), MIMIC IV-ED (patients' clinical data), and REFLACX (annotations of disease locations in chest X-rays). Results show that incorporating patients' clinical data in a DL model together with the proposed fusion methods improves the disease localization in chest X-rays by 12% in terms of Average Precision compared to a standard Mask R-CNN using chest X-rays alone. Further ablation studies also emphasize the importance of multimodal DL architectures and the incorporation of patients' clinical data in disease localization. In the interest of fostering scientific reproducibility, the architecture proposed within this investigation has been made publicly accessible( https://github.com/ChihchengHsieh/multimodal-abnormalities-detection ).

Indexed as

RadiologistsHumansOligosaccharidesRadiographyReproducibility of ResultsX-Raysmilk-derived factorOligosaccharides

Identifiers

PMID37741833
PMCPMC10517966
OpenAlexW4386980381

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.