Evidence map›Paper›PMID 37741832›Full record

ArticleNature communications2023

Tumor-intrinsic expression of the autophagy gene Atg16l1 suppresses anti-tumor immunity in colorectal cancer.

Lucia Taraborrelli, Yasin Şenbabaoğlu, Lifen Wang, Junghyun Lim, Kerrigan Blake, Noelyn Kljavin, Sarah Gierke, Alexis Scherl, James Ziai, Erin McNamara and 15 more

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT02788279 (A Phase III, Open-Label, Multicenter, Three-Arm, Randomized Study to Investigate the Efficacy and Safety of Cobimetinib Plus Atezolizumab and Atezolizumab Monotherapy vs. Regorafenib in Patients With Previously Treated Unresectable Locally Advanced or Metastatic Colorectal Adenocarcinoma), which is not on this map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
7.3field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT02788279 phase3completednot on this map

A Phase III, Open-Label, Multicenter, Three-Arm, Randomized Study to Investigate the Efficacy and Safety of Cobimetinib Plus Atezolizumab and Atezolizumab Monotherapy vs. Regorafenib in Patients With Previously Treated Unresectable Locally Advanced or Metastatic Colorectal Adenocarcinoma

TypeinterventionalSponsorHoffmann-La RocheRan2016 to 2018Enrolled363ConditionsColorectal CancerArmsAtezolizumab (MPDL3280A), an Engineered Anti-PDL1 Antibody, Cobimetinib, Regorafenib
3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 34 citations in OpenAlex.

  1. Review
  2. Autophagy modulation in cancer.Nature reviews. Drug discovery · 2026
    Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Autophagy: The convergence point of aging and cancer.Biochemistry and biophysics reports · 2025
    Review
  17. Review
  18. Article
  19. MAdvanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 7 institutions in 5 countries.

Lucia Taraborrelli *Department of Cancer Immunology, Genentech Inc., South San Francisco, USA.
Yasin Şenbabaoğlu *Department of Oncology Bioinformatics, Genentech Inc., South San Francisco, USA.
Lifen Wang *Department of Cancer Immunology, Genentech Inc., South San Francisco, USA.
Junghyun LimDepartment of Cancer Immunology, Genentech Inc., South San Francisco, USA.
Kerrigan BlakeDepartment of Cancer Immunology, Genentech Inc., South San Francisco, USA.
Noelyn KljavinDepartment of Molecular Oncology, Genentech Inc., South San Francisco, USA.
Sarah GierkeCenter for Advanced Light Microscopy, Genentech Inc., South San Francisco, USA.
Alexis ScherlDepartment of Pathology, Genentech Inc., South San Francisco, USA.ORCID http://orcid.org/0000-0001-6130-3118
James ZiaiDepartment of Pathology, Genentech Inc., South San Francisco, USA.
Erin McNamaraDepartment of In Vivo Pharmacology, Genentech Inc., South San Francisco, USA.
Mark OwyongDepartment of In Vivo Pharmacology, Genentech Inc., South San Francisco, USA.
Shilpa RaoDepartment of Oncology Bioinformatics, Genentech Inc., South San Francisco, USA.
Aslihan Karabacak CalvielloDepartment of Oncology Bioinformatics, Genentech Inc., South San Francisco, USA.
Daniel OreperDepartment of Oncology Bioinformatics, Genentech Inc., South San Francisco, USA.
Suchit JhunjhunwalaDepartment of Oncology Bioinformatics, Genentech Inc., South San Francisco, USA.ORCID http://orcid.org/0000-0003-3484-0588
Guillem ArgilesVall d'Hebrón Institute of Oncology, Vall d'Hebrón University Hospital, Universitat Autònoma de Barcelona, Barcelona, Spain.
Johanna BendellSarah Cannon Research Institute/Tennessee Oncology, Nashville, TN, USA.
Tae Won KimDepartment of Oncology, Medical Center, University of Ulsan, Seoul, Korea.ORCID http://orcid.org/0000-0001-9522-1997
Fortunato CiardielloDepartment of Precision Medicine, Università degli Studi della Campania Luigi Vanvitelli, Naples, Italy.ORCID http://orcid.org/0000-0002-4661-5540
Matthew J WongchenkoOncology Biomarker Development, Genentech, Inc., South San Francisco, CA, USA.
Frederic J de SauvageDepartment of Molecular Oncology, Genentech Inc., South San Francisco, USA.ORCID http://orcid.org/0000-0002-5275-2584
Felipe de Sousa E MeloDepartment of Discovery Oncology, Genentech Inc., South San Francisco, USA.ORCID http://orcid.org/0000-0002-9558-3098
Yibing YanOncology Biomarker Development, Genentech, Inc., South San Francisco, CA, USA.
Nathaniel R WestDepartment of Cancer Immunology, Genentech Inc., South San Francisco, USA. west.nathaniel@gene.com.ORCID http://orcid.org/0000-0001-9991-0503
Aditya MurthyDepartment of Cancer Immunology, Genentech Inc., South San Francisco, USA. aditya.murthy@gilead.com.ORCID http://orcid.org/0000-0002-6130-9568
Molecular Oncology (United States) · USCancer Research Center · USGene Therapy Laboratory · FRSarah Cannon · USUniversitat Autònoma de Barcelona · ESUniversity of Campania "Luigi Vanvitelli" · ITUniversity of Ulsan · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Microsatellite-stable colorectal cancer (MSS-CRC) is highly refractory to immunotherapy. Understanding tumor-intrinsic determinants of immunotherapy resistance is critical to improve MSS-CRC patient outcomes. Here, we demonstrate that high tumor expression of the core autophagy gene ATG16L1 is associated with poor clinical response to anti-PD-L1 therapy in KRAS-mutant tumors from IMblaze370 (NCT02788279), a large phase III clinical trial of atezolizumab (anti-PD-L1) in advanced metastatic MSS-CRC. Deletion of Atg16l1 in engineered murine colon cancer organoids inhibits tumor growth in primary (colon) and metastatic (liver and lung) niches in syngeneic female hosts, primarily due to increased sensitivity to IFN-γ-mediated immune pressure. ATG16L1 deficiency enhances programmed cell death of colon cancer organoids induced by IFN-γ and TNF, thus increasing their sensitivity to host immunity. In parallel, ATG16L1 deficiency reduces tumor stem-like populations in vivo independently of adaptive immune pressure. This work reveals autophagy as a clinically relevant mechanism of immune evasion and tumor fitness in MSS-CRC and provides a rationale for autophagy inhibition to boost immunotherapy responses in the clinic.

Indexed as

Colonic NeoplasmsColorectal NeoplasmsAnimalsAutophagyAutophagy-Related ProteinsClinical Trials, Phase III as TopicFemaleGenes, RegulatorHumansLiverMiceAtg16l1 protein, mouseAutophagy-Related Proteins

Identifiers

PMID37741832
PMCPMC10517947
OpenAlexW4386988783

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.