Evidence map›Paper›PMID 37740175›Full record

ArticleBMC bioinformatics2023

Designing and development of multi-epitope chimeric vaccine against Helicobacter pylori by exploring its entire immunogenic epitopes: an immunoinformatic approach.

Anand K Keshri, Rimanpreet Kaur, Suraj S Rawat, Naina Arora, Rajan K Pandey, Bajarang V Kumbhar, Amit Mishra, Shweta Tripathi, Amit Prasad

Open access · goldAbstract read
In one paragraph

Article in BMC bioinformatics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Therapeutic suppression ofFrontiers in microbiology · 2026
    Article
  6. Frontiers in immunology · 2026
    Review
  7. Review
  8. Biotechnologia · 2025
    Article
  9. Article
  10. Article
  11. Adjuvants forVirulence · 2024
    Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Anand K KeshriSchool of Basic Sciences, Indian Institute of Technology Mandi, Himachal Pradesh, Mandi, 175005, India.
Rimanpreet KaurSchool of Basic Sciences, Indian Institute of Technology Mandi, Himachal Pradesh, Mandi, 175005, India.
Suraj S RawatSchool of Basic Sciences, Indian Institute of Technology Mandi, Himachal Pradesh, Mandi, 175005, India.
Naina AroraSchool of Basic Sciences, Indian Institute of Technology Mandi, Himachal Pradesh, Mandi, 175005, India.
Rajan K PandeyDepartment of Medical Biochemistry and Biophysics, Karolinska Institute, 17177, Stockholm, Sweden.
Bajarang V KumbharDepartment of Biological Sciences, NMIMS, Mumbai, 400056, India.
Amit MishraCellular and Molecular Neurobiology Unit, Indian Institute of Technology Jodhpur, Jodhpur, Rajasthan, 342011, India.
Shweta TripathiSchool of Basic Sciences, Indian Institute of Technology Mandi, Himachal Pradesh, Mandi, 175005, India. t_shweta@yahoo.co.in.
Amit PrasadSchool of Basic Sciences, Indian Institute of Technology Mandi, Himachal Pradesh, Mandi, 175005, India. amitprasad@iitmandi.ac.in.
Indian Institute of Technology Mandi · INIndian Institute of Technology Jodhpur · INKarolinska Institutet · SENarsee Monjee Institute of Management Studies · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHelicobacter pylori is a prominent causative agent of gastric ulceration, gastric adenocarcinoma and gastric lymphoma and have been categorised as a group 1 carcinogen by WHO. The treatment of H. pylori with proton pump inhibitors and antibiotics is effective but also leads to increased antibiotic resistance, patient dissatisfaction, and chances of reinfection. Therefore, an effective vaccine remains the most suitable prophylactic option for mass administration against this infection.

resultsWe modelled a multi-chimera subunit vaccine candidate against H. pylori by screening its secretory/outer membrane proteins. We identified B-cell, MHC-II and IFN-γ-inducing epitopes within these proteins. The population coverage, antigenicity, physiochemical properties and secondary structure were evaluated using different in-silico tools, which showed it can be a good and effective vaccine candidate. The 3-D construct was predicted, refined, validated and docked with TLRs. Finally, we performed the molecular docking/simulation and immune simulation studies to validate the stability of interaction and in-silico cloned the epitope sequences into a pET28b(+) plasmid vector.

conclusionThe multiepitope-constructed vaccine contains T- cells, B-cells along with IFN-γ inducing epitopes that have the property to generate good cell-mediated immunity and humoral response. This vaccine can protect most of the world's population. The docking study and immune simulation revealed a good binding with TLRs and cell-mediated and humoral immune responses, respectively. Overall, we attempted to design a multiepitope vaccine and expect this vaccine will show an encouraging result against H. pylori infection in in-vivo use.

Indexed as

AdenocarcinomaHelicobacter pyloriVaccinesEpitopesHumansMolecular Docking SimulationEpitopesVaccinesHelicobacter pyloriImmunoinformaticsInfectionMulti-epitopesVaccine

Identifiers

PMID37740175
PMCPMC10517479
OpenAlexW4386976919

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.