Evidence map›Paper›PMID 37740029›Full record

ArticleISME communications2023

Predicting global distributions of eukaryotic plankton communities from satellite data.

Hiroto Kaneko, Hisashi Endo, Nicolas Henry, Cédric Berney, Frédéric Mahé, Julie Poulain, Karine Labadie, Odette Beluche, Roy El Hourany, Tara Oceans Coordinators and 9 more

Abstract read
In one paragraph

Article in ISME communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Ecological associations distribution modelling of marine plankton at a global scale.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Hiroto KanekoInstitute for Chemical Research, Kyoto University, Uji, Kyoto, Japan.ORCID http://orcid.org/0000-0002-7127-2551
Hisashi EndoInstitute for Chemical Research, Kyoto University, Uji, Kyoto, Japan.ORCID http://orcid.org/0000-0003-0016-1624
Nicolas HenryCNRS, Sorbonne Université, FR2424, ABiMS, Station Biologique de Roscoff, 29680, Roscoff, France.
Cédric BerneyCNRS, Sorbonne Université, FR2424, ABiMS, Station Biologique de Roscoff, 29680, Roscoff, France.ORCID http://orcid.org/0000-0001-8689-9907
Frédéric MahéCIRAD, UMR PHIM, F-34398, Montpellier, France.
Julie PoulainGénomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, 2 Rue Gaston Crémieux, 91057, Evry, France.
Karine LabadieGenoscope, Institut François Jacob, Commissariat à l'Energie Atomique (CEA), Université Paris-Saclay, 2 Rue Gaston Crémieux, 91057, Evry, France.
Odette BelucheGenoscope, Institut François Jacob, Commissariat à l'Energie Atomique (CEA), Université Paris-Saclay, 2 Rue Gaston Crémieux, 91057, Evry, France.
Roy El HouranyUniv. Littoral Côte d'Opale, Univ. Lille, CNRS, IRD, UMR 8187, LOG, Laboratoire d'Océanologie et de Géosciences, F 62930, Wimereux, France.ORCID http://orcid.org/0000-0002-6454-1645
Tara Oceans Coordinators
Samuel ChaffronResearch Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/Tara GOSEE, 75016, Paris, France.
Patrick WinckerGénomique Métabolique, Genoscope, Institut François Jacob, CEA, CNRS, Univ Evry, Université Paris-Saclay, 2 Rue Gaston Crémieux, 91057, Evry, France.ORCID http://orcid.org/0000-0001-7562-3454
Ryosuke NakamuraDigital Architecture Research Center, National Institute of Advanced Industrial Science and Technology (AIST), Tokyo, Japan.
Lee Karp-BossSchool of Marine Sciences, University of Maine, Orono, 04469, ME, USA.ORCID http://orcid.org/0000-0003-2851-1921
Emmanuel BossSchool of Marine Sciences, University of Maine, Orono, 04469, ME, USA.ORCID http://orcid.org/0000-0002-8334-9595
Chris BowlerResearch Federation for the study of Global Ocean Systems Ecology and Evolution, FR2022/Tara GOSEE, 75016, Paris, France.ORCID http://orcid.org/0000-0003-3835-6187
Colomban de VargasCNRS, Sorbonne Université, FR2424, ABiMS, Station Biologique de Roscoff, 29680, Roscoff, France.ORCID http://orcid.org/0000-0002-6476-6019
Kentaro TomiiArtificial Intelligence Research Center, National Institute of Advanced Industrial Science and Technology (AIST), Tokyo, Japan. k-tomii@aist.go.jp.ORCID http://orcid.org/0000-0002-4567-4768
Hiroyuki OgataInstitute for Chemical Research, Kyoto University, Uji, Kyoto, Japan. ogata@kuicr.kyoto-u.ac.jp.ORCID http://orcid.org/0000-0001-6594-377X

Funding

Agence Nationale de la Recherche (French National Research Agency) ANR-10-INBS-09EC | Horizon 2020 Framework Programme (EU Framework Programme for Research and Innovation H2020) 101082021EC | Horizon 2020 Framework Programme (EU Framework Programme for Research and Innovation H2020) 835067MEXT | Japan Science and Technology Agency (JST) JPMJSP2110MEXT | Japan Society for the Promotion of Science (JSPS) 18H02279MEXT | Japan Society for the Promotion of Science (JSPS) 19H05667
6 · The paper itself

Abstract

Satellite remote sensing is a powerful tool to monitor the global dynamics of marine plankton. Previous research has focused on developing models to predict the size or taxonomic groups of phytoplankton. Here, we present an approach to identify community types from a global plankton network that includes phytoplankton and heterotrophic protists and to predict their biogeography using global satellite observations. Six plankton community types were identified from a co-occurrence network inferred using a novel rDNA 18 S V4 planetary-scale eukaryotic metabarcoding dataset. Machine learning techniques were then applied to construct a model that predicted these community types from satellite data. The model showed an overall 67% accuracy in the prediction of the community types. The prediction using 17 satellite-derived parameters showed better performance than that using only temperature and/or the concentration of chlorophyll a. The constructed model predicted the global spatiotemporal distribution of community types over 19 years. The predicted distributions exhibited strong seasonal changes in community types in the subarctic-subtropical boundary regions, which were consistent with previous field observations. The model also identified the long-term trends in the distribution of community types, which suggested responses to ocean warming.

Identifiers

PMID37740029
PMCPMC10517053

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.