Evidence map›Paper›PMID 37739469›Full record

ArticleBMJ open2023

Who is most at risk of dying if infected with SARS-CoV-2? A mortality risk factor analysis using machine learning of patients with COVID-19 over time: a large population-based cohort study in Mexico.

Lauren D Liao, Alan E Hubbard, Juan Pablo Gutierrez, Arturo Juárez-Flores, Kendall Kikkawa, Ronit Gupta, Yana Yarmolich, Iván de Jesús Ascencio-Montiel, Stefano M Bertozzi

Abstract read
In one paragraph

Article in BMJ open, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Lauren D LiaoDivision of Biostatistics, University of California Berkeley, Berkeley, California, USA ldliao@berkeley.edu.ORCID 0000-0003-4697-6909
Alan E HubbardDivision of Biostatistics, University of California Berkeley, Berkeley, California, USA.
Juan Pablo GutierrezCenter for Policy, Population and Health Research, School of Medicine, Universidad Nacional Autónoma de México, Ciudad de México, Mexico.ORCID 0000-0002-0557-5562
Arturo Juárez-FloresCenter for Policy, Population and Health Research, School of Medicine, Universidad Nacional Autónoma de México, Ciudad de México, Mexico.
Kendall KikkawaMicron Technology, Boise, Idaho, USA.
Ronit GuptaCollege of Computing, Data Science, and Society, University of California Berkeley, Berkeley, California, USA.
Yana YarmolichDepartment of Electrical Engineering and Computer Sciences, University of California, Berkeley, Berkeley, California, USA.
Iván de Jesús Ascencio-MontielInstituto Mexicano del Seguro Social, Ciudad de México, Mexico.
Stefano M BertozziDivision of Health Policy and Management, University of California, Berkeley, Berkeley, California, USA.ORCID 0000-0002-1723-7085

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveCOVID-19 would kill fewer people if health programmes can predict who is at higher risk of mortality because resources can be targeted to protect those people from infection. We predict mortality in a very large population in Mexico with machine learning using demographic variables and pre-existing conditions.

designCohort study.

settingMarch 2020 to November 2021 in Mexico, nationally represented.

participants1.4 million laboratory-confirmed patients with COVID-19 in Mexico at or over 20 years of age. PRIMARY AND SECONDARY OUTCOME MEASURES: Analysis is performed on data from March 2020 to November 2021 and over three phases: (1) from March to October in 2020, (2) from November 2020 to March 2021 and (3) from April to November 2021. We predict mortality using an ensemble machine learning method, super learner, and independently estimate the adjusted mortality relative risk of each pre-existing condition using targeted maximum likelihood estimation.

resultsSuper learner fit has a high predictive performance (C-statistic: 0.907), where age is the most predictive factor for mortality. After adjusting for demographic factors, renal disease, hypertension, diabetes and obesity are the most impactful pre-existing conditions. Phase analysis shows that the adjusted mortality risk decreased over time while relative risk increased for each pre-existing condition.

conclusionsWhile age is the most important predictor of mortality, younger individuals with hypertension, diabetes and obesity are at comparable mortality risk as individuals who are 20 years older without any of the three conditions. Our model can be continuously updated to identify individuals who should most be protected against infection as the pandemic evolves.

Indexed as

COVID-19HypertensionAdultCohort StudiesFactor Analysis, StatisticalHumansMachine LearningMexicoObesitySARS-CoV-2Young AdultCOVID-19epidemiologygeneral diabeteshypertensionrisk factorsstatistics & research methods

Identifiers

PMID37739469
PMCPMC10533798

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.