Evidence map›Paper›PMID 37738276›Full record

ArticlePloS one2023

The effects of different biochars on Caenorhabditis elegans and the underlying transcriptomic mechanisms.

Yixuan Chen, Xinrui Wang, Jie Li, Zhiwen Wang, Tingting Song, Xin Lai, Guilong Zhang, Weibin Ruan

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.2field-weighted citation impact, top 51% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 1 country.

Yixuan ChenAgro-Environmental Protection Institute, Ministry of Agriculture and Rural Affairs, Tianjin, China.
Xinrui WangAgro-Environmental Protection Institute, Ministry of Agriculture and Rural Affairs, Tianjin, China.
Jie LiAgro-Environmental Protection Institute, Ministry of Agriculture and Rural Affairs, Tianjin, China.
Zhiwen WangCollege of Resources and Environment, Northeast Agricultural University, Harbin, China.
Tingting SongInstitute of Environment and Sustainable Development in Agriculture, CAAS, Beijing, China.
Xin LaiAgro-Environmental Protection Institute, Ministry of Agriculture and Rural Affairs, Tianjin, China.
Guilong ZhangAgro-Environmental Protection Institute, Ministry of Agriculture and Rural Affairs, Tianjin, China.ORCID 0000-0001-7398-1733
Weibin RuanCollege of Life Sciences, Nankai University, Tianjin, China.
Agro-Environmental Protection Institute · CNInstitute of Environment and Sustainable Development in Agriculture · CNNankai University · CNNortheast Agricultural University · CNShenyang Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Different biochars have diverse properties, with ambiguous effects on soil nematodes. This study investigated how aspen sawdust (ABC), bamboo powder (BBC), maize straw (MBC) and peanut-shell biochars (PBC) affected Caenorhabditis elegans via culture assays and RNA-seq analysis. The results showed that biochars derived from different agricultural materials varied significantly in physicochemical properties, and PBC produced more volatile organic compounds (VOCs) to attract C. elegans than ABC, BBC and MBC. Moreover, worms in ABC experienced the worst outcomes, while worms in PBC experienced milder impacts. Nematode body length decreased to 724.6 μm, 784.0 μm and 799.7 μm on average in ABC, BBC and MBC, respectively, compared to the control (1052 μm) and PBC treatments (960 μm). The brood size in ABC, MBC, BBC and PBC decreased 41.1%, 39.4%, 39.2% and 19.1% compared to the control, respectively. Furthermore, the molecular mechanisms of biochar-induced developmental effects on C. elegans were explored. Although several differentially expressed genes (DEGs) were different among the four biochars, worm phenotypic changes were mainly related to col genes (col-129; col-140; col-40; col-184), bli-6, sqt-3, perm-2/4, cdk-8, daf-16 and sod-1/2/5, which are associated with cuticle collagen synthesis, eggshell formation in postembryonic growth and rhythmic processes. Our study suggests that different properties of biochars could be crucial to soil nematodes, as well as the worms' biochemical changes are important for the health in agriculture soil.

Indexed as

Caenorhabditis elegansTranscriptomeAnimalsArachisCharcoalGene Expression ProfilingSoilbiocharCharcoalSoil

Identifiers

PMID37738276
PMCPMC10516431
OpenAlexW4386953761

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.