Evidence map›Paper›PMID 37736792›Full record

ArticleApplied microbiology and biotechnology2023

Regulatory-systemic approach in Aspergillus niger for bioleaching improvement by controlling precipitation.

Ali Naderi, Farzane Vakilchap, Ehsan Motamedian, Seyyed Mohammad Mousavi

Abstract read
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In one paragraph

Article in Applied microbiology and biotechnology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.1field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Ali NaderiBiotechnology Group, Chemical Engineering Department, Tarbiat Modares University, Tehran, Iran.
Farzane VakilchapBiotechnology Group, Chemical Engineering Department, Tarbiat Modares University, Tehran, Iran.
Ehsan MotamedianBiotechnology Group, Chemical Engineering Department, Tarbiat Modares University, Tehran, Iran.
Seyyed Mohammad MousaviBiotechnology Group, Chemical Engineering Department, Tarbiat Modares University, Tehran, Iran. mousavi_m@modares.ac.ir.ORCID http://orcid.org/0000-0002-0381-8292
Tarbiat Modares University · IR

Funding

Tarbiat Modares University IG-39701
6 · The paper itself

Abstract

In the context of e-waste recycling by fungal bioleaching, nickel and cobalt precipitate as toxic metals by oxalic acid, whereas organic acids, such as citric, act as a high-performance chelating agent in dissolving these metals. Oxalic acid elimination requires an excess and uneconomical carbon source concentration in culture media. To resolve this issue, a novel and straightforward systems metabolic engineering method was devised to switch metabolic flux from oxalic acid to citric acid. In this technique, the genome-scale metabolic model of Aspergillus niger was applied to predicting flux variability and key reactions through the calculation of multiple optimal solutions for cellular regulation. Accordingly, BRENDA regulators and a novel molecular docking-oriented approach were defined a regulatory medium for this end. Then, ligands were evaluated in fungal culture to assess their impact on organic acid production for bioleaching of copper and nickel from waste telecommunication printed circuit boards. The protein structure of oxaloacetate hydrolase was modeled based on homology modeling for molecular docking. Metformin, glutathione, and sodium fluoride were found to be effective as inhibitors of oxalic acid production, enabling the production of 8100 ppm citric acid by controlling cellular metabolism. Indirect bioleaching demonstrated that nickel did not precipitate, and the bioleaching efficiency of copper and nickel increased from 40% and 24% to 61% and 100%, respectively. Bioleaching efficiency was evaluated qualitatively by FE-SEM, EDX, mapping, and XRD analysis. KEY POINTS: • A regulatory-systemic procedure for controlling cellular metabolism was introduced • Metformin inhibited oxalic acid, leading to 8100 ppm citric acid production • Bioleaching of copper and nickel in TPCBs improved by 21% and 76.

Indexed as

Aspergillus nigerMetforminAspergillusCitric AcidCopperMolecular Docking SimulationNickelOxalic AcidCitric AcidCopperMetforminNickelOxalic AcidAspergillus nigerBioleachingGenome-scale metabolic model (GEMs)Homology modelingMolecular dockingTelecommunication printed circuit boards (TPCBs)

Identifiers

PMID37736792
OpenAlexW4386944278

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.