Evidence map›Paper›PMID 37733873›Full record

ArticleScience (New York, N.Y.)2023

Structural basis for inactivation of PRC2 by G-quadruplex RNA.

Jiarui Song, Anne R Gooding, Wayne O Hemphill, Brittney D Love, Anne Robertson, Liqi Yao, Leonard I Zon, Trista E North, Vignesh Kasinath, Thomas R Cech

Open access · hybridAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
10.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Review
  11. Article
  12. Phosphorylation event changes the RNA binding mode of EZH2 disordered segment.Protein science : a publication of the Protein Society · 2026
    Article
  13. TDP-43 controls RNA structure through high affinity lattice interactions.bioRxiv : the preprint server for biology · 2025
    Article
  14. Article
  15. Review
  16. HISTONE DEACETYLASE-1 is required for epigenome stability inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  17. Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Jiarui SongDepartment of Biochemistry, University of Colorado Boulder, Boulder, CO 80303, USA.ORCID 0000-0003-1376-1389
Anne R GoodingDepartment of Biochemistry, University of Colorado Boulder, Boulder, CO 80303, USA.ORCID 0000-0002-5367-0038
Wayne O HemphillDepartment of Biochemistry, University of Colorado Boulder, Boulder, CO 80303, USA.ORCID 0000-0002-8136-1574
Brittney D LoveStem Cell and Regenerative Biology Department, Harvard University, Cambridge, MA 02138, USA.
Anne RobertsonStem Cell and Regenerative Biology Department, Harvard University, Cambridge, MA 02138, USA.
Liqi YaoDepartment of Biochemistry, University of Colorado Boulder, Boulder, CO 80303, USA.ORCID 0000-0001-8344-6531
Leonard I ZonStem Cell and Regenerative Biology Department, Harvard University, Cambridge, MA 02138, USA.ORCID 0000-0003-0860-926X
Trista E NorthStem Cell and Regenerative Biology Department, Harvard University, Cambridge, MA 02138, USA.
Vignesh KasinathDepartment of Biochemistry, University of Colorado Boulder, Boulder, CO 80303, USA.ORCID 0000-0003-2686-0546
Thomas R CechDepartment of Biochemistry, University of Colorado Boulder, Boulder, CO 80303, USA.ORCID 0000-0001-7338-3389
Howard Hughes Medical Institute · USHarvard University · USUniversity of Colorado Boulder · US

Funding

Molecular Circuits in the Hematopoietic Stem Cell NicheRC2DK120535 · NIDDK · BOSTON CHILDREN'S HOSPITAL · PI COLLINS, JAMES J, DALEY, GEORGE Q · 2020 to 2024
$8.2M
Transcriptional response to signaling during hematopoiesisR01HL144780 · NHLBI · BOSTON CHILDREN'S HOSPITAL · PI ZON, LEONARD IRA · 2019 to 2022
$2.1M
Structure and Mechanism of Epigenetic Gene SilencingR35GM155426 · NIGMS · UNIVERSITY OF COLORADO · PI Vignesh Kasinath · 2024 to 2026
$1.2M
Uncovering the Role of Synaptonemal Complex in Meiotic Recombination by Cryo-electron TomographyR00GM132544 · NIGMS · UNIVERSITY OF COLORADO · PI KASINATH, VIGNESH · 2021 to 2023
$747k
Biophysical interrogation of the RNA-mediated mechanisms regulating Polycomb Repressive Complex 2 activityF32GM147934 · NIGMS · UNIVERSITY OF COLORADO · PI HEMPHILL, WAYNE OLIVER · 2022 to 2024
$213k
NHLBI NIH HHS R01 HL144780NIDDK NIH HHS RC2 DK120535NIGMS NIH HHS F32 GM147934NIGMS NIH HHS R00 GM132544NIGMS NIH HHS R35 GM155426
6 · The paper itself

Abstract

Polycomb repressive complex 2 (PRC2) silences genes through trimethylation of histone H3K27. PRC2 associates with numerous precursor messenger RNAs (pre-mRNAs) and long noncoding RNAs (lncRNAs) with a binding preference for G-quadruplex RNA. In this work, we present a 3.3-Å-resolution cryo-electron microscopy structure of PRC2 bound to a G-quadruplex RNA. Notably, RNA mediates the dimerization of PRC2 by binding both protomers and inducing a protein interface composed of two copies of the catalytic subunit EZH2, thereby blocking nucleosome DNA interaction and histone H3 tail accessibility. Furthermore, an RNA-binding loop of EZH2 facilitates the handoff between RNA and DNA, another activity implicated in PRC2 regulation by RNA. We identified a gain-of-function mutation in this loop that activates PRC2 in zebrafish. Our results reveal mechanisms for RNA-mediated regulation of a chromatin-modifying enzyme.

Indexed as

G-QuadruplexesPolycomb Repressive Complex 2RNA, Long NoncodingRNA PrecursorsAnimalsCryoelectron MicroscopyCrystallography, X-RayEnhancer of Zeste Homolog 2 ProteinGain of Function MutationHistonesPromoter Regions, GeneticProtein BindingProtein ConformationProtein MultimerizationZebrafishEnhancer of Zeste Homolog 2 ProteinHistonesPolycomb Repressive Complex 2RNA, Long NoncodingRNA Precursors

Identifiers

PMID37733873
PMCPMC11191771
OpenAlexW4386917171

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.