Evidence map›Paper›PMID 37733785›Full record

ArticlePLoS biology2023

Construction of an artificial phosphoketolase pathway that efficiently catabolizes multiple carbon sources to acetyl-CoA.

Yiqun Yang, Yuwan Liu, Haodong Zhao, Dingyu Liu, Jie Zhang, Jian Cheng, Qiaoyu Yang, Huanyu Chu, Xiaoyun Lu, Mengting Luo and 4 more

Abstract read
In one paragraph

Article in PLoS biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Yiqun YangTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.
Yuwan LiuTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.
Haodong ZhaoTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.
Dingyu LiuTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.
Jie ZhangTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.
Jian ChengTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.
Qiaoyu YangTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.
Huanyu ChuTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.
Xiaoyun LuTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.
Mengting LuoSchool of Life Science and Technology, Wuhan Polytechnic University, Wuhan, China.
Xiang ShengTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.
Yi-Heng P J ZhangTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.
Huifeng JiangTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.ORCID 0000-0002-3757-7896
Yanhe MaTianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The canonical glycolysis pathway is responsible for converting glucose into 2 molecules of acetyl-coenzyme A (acetyl-CoA) through a cascade of 11 biochemical reactions. Here, we have designed and constructed an artificial phosphoketolase (APK) pathway, which consists of only 3 types of biochemical reactions. The core enzyme in this pathway is phosphoketolase, while phosphatase and isomerase act as auxiliary enzymes. The APK pathway has the potential to achieve a 100% carbon yield to acetyl-CoA from any monosaccharide by integrating a one-carbon condensation reaction. We tested the APK pathway in vitro, demonstrating that it could efficiently catabolize typical C1-C6 carbohydrates to acetyl-CoA with yields ranging from 83% to 95%. Furthermore, we engineered Escherichia coli stain capable of growth utilizing APK pathway when glycerol act as a carbon source. This novel catabolic pathway holds promising route for future biomanufacturing and offering a stoichiometric production platform using multiple carbon sources.

Indexed as

Aldehyde-LyasesCarbonAcetyl Coenzyme AGlucoseMetabolic EngineeringAcetyl Coenzyme AAldehyde-LyasesCarbonGlucosephosphoketolase

Identifiers

PMID37733785
PMCPMC10547157

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.