Evidence map›Paper›PMID 37732776›Full record

ArticleMicrobiology spectrum2023

Multi-environment ecogenomics analysis of the cosmopolitan phylum Gemmatimonadota.

Izabela Mujakić, Pedro J Cabello-Yeves, Cristian Villena-Alemany, Kasia Piwosz, Francisco Rodriguez-Valera, Antonio Picazo, Antonio Camacho, Michal Koblížek

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
11.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 64 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 4 countries.

Izabela MujakićLaboratory of Anoxygenic Phototrophs, Institute of Microbiology of the Czech Academy of Sciences , Třeboň, Czechia.ORCID 0000-0001-5602-7331
Pedro J Cabello-YevesCavanilles Institute of Biodiversity and Evolutionary Biology, University of Valencia , Paterna, Valencia, Spain.ORCID 0000-0003-2013-3233
Cristian Villena-AlemanyLaboratory of Anoxygenic Phototrophs, Institute of Microbiology of the Czech Academy of Sciences , Třeboň, Czechia.ORCID 0000-0002-6158-1879
Kasia PiwoszDepartment of Fisheries Oceanography and Marine Ecology, National Marine Fisheries Research Institute , Gdynia, Poland.ORCID 0000-0002-3248-3364
Francisco Rodriguez-ValeraEvolutionary Genomics Group, Departamento de Producción Vegetal y Microbiología, Universidad Miguel Hernández , San Juan de Alicante, Alicante, Spain.ORCID 0000-0002-9809-2059
Antonio PicazoCavanilles Institute of Biodiversity and Evolutionary Biology, University of Valencia , Paterna, Valencia, Spain.ORCID 0000-0002-7572-9686
Antonio CamachoCavanilles Institute of Biodiversity and Evolutionary Biology, University of Valencia , Paterna, Valencia, Spain.ORCID 0000-0003-0841-2010
Michal KoblížekLaboratory of Anoxygenic Phototrophs, Institute of Microbiology of the Czech Academy of Sciences , Třeboň, Czechia.ORCID 0000-0001-6938-2340
Czech Academy of Sciences · CZParc Científic de la Universitat de València · ESUniversitat de Miguel Hernández d'Elx · ESNational Marine Fisheries Research Institute · PL

Funding

Fundación Alfonso Martín Escudero (Alfonso Martin Escudero Foundation)Generalitat Valenciana (GVA) APOSTD/2019/009Generalitat Valenciana (GVA) "HIDRAS3" PROMETEO/2019/009Grantová Agentura České Republiky (GAČR) PhotoGemm+ no. 19-28778XMEC | Agencia Estatal de Investigación (AEI) CLIMAWET-CONS (PID2019-104742RB-I00)MEC | Agencia Estatal de Investigación (AEI) "VIREVO" CGL2016-76273-P [MCI/AEI/FEDER EU]
6 · The paper itself

Abstract

importanceGemmatimonadota is a rarely studied bacterial phylum consisting of a handful of cultured species. Recent culture-independent studies documented that these organisms are distributed in many environments, including soil, marine, fresh, and waste waters. However, due to the lack of cultured species, information about their metabolic potential and environmental role is scarce. Therefore, we collected Gemmatimonadota metagenome-assembled genomes (MAGs) from different habitats and performed a systematic analysis of their genomic characteristics and metabolic potential. Our results show how Gemmatimonadota have adapted their genomes to different environments.

Indexed as

anoxygenic phototrophsgemmatimonadetesGemmatimonadotaMAGsmetagenomeRuBisCO

Identifiers

PMID37732776
PMCPMC10581226
OpenAlexW4386911013

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.