Evidence map›Paper›PMID 37731199›Full record

ArticleJournal of cellular and molecular medicine2023

Transcriptome analysis of six tissues obtained post-mortem from sepsis patients.

Fabiano Pinheiro da Silva, André Nicolau Aquime Gonçalves, Amaro Nunes Duarte-Neto, Thomaz Lüscher Dias, Hermes Vieira Barbeiro, Cristiane Naffah Souza Breda, Leandro Carvalho Dantas Breda, Niels Olsen Saraiva Câmara, Helder I Nakaya

Open access · goldAbstract read
In one paragraph

Article in Journal of cellular and molecular medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Facing stress and inflammation: From the cell to the planet.World journal of experimental medicine · 2024
    Review
  5. Review
  6. Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Fabiano Pinheiro da SilvaLaboratório de Emergências Clínicas, Faculdade de Medicina, Universidade de São Paulo, São Paulo, Brazil.ORCID 0000-0003-2673-2202
André Nicolau Aquime GonçalvesFaculdade de Ciências Farmacêuticas, Universidade de São Paulo, São Paulo, Brazil.
Amaro Nunes Duarte-NetoDepartamento de Patologia, Faculdade de Medicina, Universidade de São Paulo, São Paulo, Brazil.
Thomaz Lüscher DiasFaculdade de Ciências Farmacêuticas, Universidade de São Paulo, São Paulo, Brazil.
Hermes Vieira BarbeiroLaboratório de Emergências Clínicas, Faculdade de Medicina, Universidade de São Paulo, São Paulo, Brazil.
Cristiane Naffah Souza BredaDepartamento de Imunologia, Instituto de Ciências Biomédicas, Universidade de São Paulo, São Paulo, Brazil.
Leandro Carvalho Dantas BredaDepartamento de Imunologia, Instituto de Ciências Biomédicas, Universidade de São Paulo, São Paulo, Brazil.
Niels Olsen Saraiva CâmaraDepartamento de Imunologia, Instituto de Ciências Biomédicas, Universidade de São Paulo, São Paulo, Brazil.
Helder I NakayaFaculdade de Ciências Farmacêuticas, Universidade de São Paulo, São Paulo, Brazil.
Universidade de São Paulo · BRHospital das Clínicas da Faculdade de Medicina da Universidade de São Paulo · BR

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico 303924/2018-7Fundação de Amparo à Pesquisa do Estado de São Paulo 2020/03905-8
6 · The paper itself

Abstract

Septic shock is a life-threatening clinical condition characterized by a robust immune inflammatory response to disseminated infection. Little is known about its impact on the transcriptome of distinct human tissues. To address this, we performed RNA sequencing of samples from the prefrontal cortex, hippocampus, heart, lung, kidney and colon of seven individuals who succumbed to sepsis and seven uninfected controls. We identified that the lungs and colon were the most affected organs. While gene activation dominated, strong inhibitory signals were also detected, particularly in the lungs. We found that septic shock is an extremely heterogeneous disease, not only when different individuals are investigated, but also when comparing different tissues of the same patient. However, several pathways, such as respiratory electron transport and other metabolic functions, revealed distinctive alterations, providing evidence that tissue specificity is a hallmark of sepsis. Strikingly, we found evident signals of accelerated ageing in our sepsis population.

Indexed as

Gene Expression ProfilingSepsisTranscriptomeAgedAged, 80 and overAutopsyFemaleHumansLungMaleMiddle AgedOrgan SpecificityShock, Septiccell responseimmunitysepsistranscriptomics

Identifiers

PMID37731199
PMCPMC10568675
OpenAlexW4386910447

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.