Evidence map›Paper›PMID 37731193›Full record

ArticleMolecular plant pathology2023

degQ associated with the degS/degU two-component system regulates biofilm formation, antimicrobial metabolite production, and biocontrol activity in Bacillus velezensis DMW1.

Chenjie Yu, Junqing Qiao, Qurban Ali, Qifan Jiang, Yan Song, Linli Zhu, Qin Gu, Rainer Borriss, Suomeng Dong, Xuewen Gao and 1 more

Open access · goldAbstract read
In one paragraph

Article in Molecular plant pathology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Journal of bacteriology · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Antimicrobial Activity ofInternational journal of molecular sciences · 2025
    Review
  8. Article
  9. Review
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Chenjie YuCollege of Plant Protection, Key Laboratory of Integrated Management of Crop Diseases and Pests, Ministry of Education, Sanya Institute of Nanjing Agricultural University, Nanjing Agricultural University, Nanjing, China.
Junqing QiaoJiangsu Academy of Agricultural Sciences, Institute of Plant Protection, Nanjing, China.
Qurban AliCollege of Plant Protection, Key Laboratory of Integrated Management of Crop Diseases and Pests, Ministry of Education, Sanya Institute of Nanjing Agricultural University, Nanjing Agricultural University, Nanjing, China.
Qifan JiangCollege of Plant Protection, Key Laboratory of Integrated Management of Crop Diseases and Pests, Ministry of Education, Sanya Institute of Nanjing Agricultural University, Nanjing Agricultural University, Nanjing, China.
Yan SongCollege of Plant Protection, Key Laboratory of Integrated Management of Crop Diseases and Pests, Ministry of Education, Sanya Institute of Nanjing Agricultural University, Nanjing Agricultural University, Nanjing, China.
Linli ZhuCollege of Plant Protection, Key Laboratory of Integrated Management of Crop Diseases and Pests, Ministry of Education, Sanya Institute of Nanjing Agricultural University, Nanjing Agricultural University, Nanjing, China.
Qin GuCollege of Plant Protection, Key Laboratory of Integrated Management of Crop Diseases and Pests, Ministry of Education, Sanya Institute of Nanjing Agricultural University, Nanjing Agricultural University, Nanjing, China.ORCID 0000-0002-3722-6375
Rainer BorrissInstitut für Biologie, Humboldt University Berlin, Berlin, Germany.
Suomeng DongCollege of Plant Protection, Key Laboratory of Integrated Management of Crop Diseases and Pests, Ministry of Education, Sanya Institute of Nanjing Agricultural University, Nanjing Agricultural University, Nanjing, China.ORCID 0000-0002-9623-6776
Xuewen GaoCollege of Plant Protection, Key Laboratory of Integrated Management of Crop Diseases and Pests, Ministry of Education, Sanya Institute of Nanjing Agricultural University, Nanjing Agricultural University, Nanjing, China.ORCID 0000-0002-5328-9325
Huijun WuCollege of Plant Protection, Key Laboratory of Integrated Management of Crop Diseases and Pests, Ministry of Education, Sanya Institute of Nanjing Agricultural University, Nanjing Agricultural University, Nanjing, China.ORCID 0000-0001-5586-1607
Nanjing Agricultural University · CNHumboldt-Universität zu Berlin · DEJiangsu Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The gram-positive bacterium Bacillus velezensis strain DMW1 produces a high level of antimicrobial metabolites that can suppress the growth of phytopathogens. We investigated the mechanism used by degQ and the degS/degU two-component system to regulate the biocontrol characteristics of DMW1. When degQ and degU were deleted, the biofilm formation, cell motility, colonization activities, and antifungal abilities of ΔdegQ and ΔdegU were significantly reduced compared to wild-type DMW1. The expression levels of biofilm-related genes (epsA, epsB, epsC, and tasA) and swarming-related genes (swrA and swrB) were all down-regulated. We also evaluated the impact on secondary metabolites of these two genes. The degQ and degU genes reduced surfactin and macrolactin production and up-regulated the production of fengycin, iturin, bacillaene, and difficidin metabolites. The reverse transcription-quantitative PCR results were consistent with these observations. Electrophoretic mobility shift assay and microscale thermophoresis revealed that DegU can bind to the promoter regions of these six antimicrobial metabolite genes and regulate their synthesis. In conclusion, we provided systematic evidence to demonstrate that the degQ and degU genes are important regulators of multicellular behaviour and antimicrobial metabolic processes in B. velezensis DMW1 and suggested novel amenable strains to be used for the industrial production of antimicrobial metabolites.

Indexed as

Anti-Infective AgentsBacillusAntifungal AgentsBacillus subtilisBacterial ProteinsBiofilmsAntifungal AgentsAnti-Infective AgentsBacterial Proteinsantimicrobial metabolitesBacillus velezensisbiocontrol activitybiofilm formationDNA-protein interaction

Identifiers

PMID37731193
PMCPMC10632791
OpenAlexW4386910409

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.