Evidence map›Paper›PMID 37730437›Full record

ArticleGenome research2023

Single-nucleus transcriptomic mapping uncovers targets for traumatic brain injury.

Qiuyun Yang, Lingxuan Zhang, Manrui Li, Yang Xu, Xiaogang Chen, Ruixuan Yuan, Xiaofeng Ou, Min He, Miao Liao, Lin Zhang and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Genome research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. GFAPProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

Qiuyun Yang *Department of Forensic Genetics, West China School of Basic Medical Sciences and Forensic Medicine, Sichuan University, Chengdu 610000, China.
Lingxuan Zhang *West China School of Basic Medical Sciences and Forensic Medicine, Sichuan University, Chengdu 610000, China.
Manrui Li *Department of Forensic Genetics, West China School of Basic Medical Sciences and Forensic Medicine, Sichuan University, Chengdu 610000, China.
Yang XuDepartment of Forensic Genetics, West China School of Basic Medical Sciences and Forensic Medicine, Sichuan University, Chengdu 610000, China.
Xiaogang ChenDepartment of Forensic Pathology and Forensic Clinical Medicine, West China School of Basic Medical Sciences and Forensic Medicine, Sichuan University, Chengdu 610000, China.
Ruixuan YuanWest China School of Basic Medical Sciences and Forensic Medicine, Sichuan University, Chengdu 610000, China.
Xiaofeng OuDepartment of Critical Care Medicine, Sichuan University, Chengdu 610000, China.
Min HeDepartment of Critical Care Medicine, Sichuan University, Chengdu 610000, China.
Miao LiaoDepartment of Forensic Genetics, West China School of Basic Medical Sciences and Forensic Medicine, Sichuan University, Chengdu 610000, China.
Lin ZhangSichuan University, Chengdu 610041, China.
Hao DaiDepartment of Forensic Pathology and Forensic Clinical Medicine, West China School of Basic Medical Sciences and Forensic Medicine, Sichuan University, Chengdu 610000, China.
Meili LvDepartment of Immunology, West China School of Basic Medical Sciences and Forensic Medicine, Sichuan University, Chengdu 610000, China.
Xiaoqi XieDepartment of Critical Care Medicine, Sichuan University, Chengdu 610000, China; xmchen990@gmail.com liangweibo@gmail.com xiaoqixie1898060@163.com.
Weibo LiangDepartment of Forensic Genetics, West China School of Basic Medical Sciences and Forensic Medicine, Sichuan University, Chengdu 610000, China; xmchen990@gmail.com liangweibo@gmail.com xiaoqixie1898060@163.com.
Xiameng ChenDepartment of Forensic Pathology and Forensic Clinical Medicine, West China School of Basic Medical Sciences and Forensic Medicine, Sichuan University, Chengdu 610000, China; xmchen990@gmail.com liangweibo@gmail.com xiaoqixie1898060@163.com.ORCID 0000-0003-4393-9053
West China Medical Center of Sichuan University · CNSichuan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The subventricular zone (SVZ) is a neurogenic niche that contributes to homeostasis and repair after brain injury. However, the effects of mild traumatic brain injury (mTBI) on the divergence of the regulatory DNA landscape within the SVZ and its link to functional alterations remain unexplored. In this study, we mapped the transcriptome atlas of murine SVZ and its responses to mTBI at the single-cell level. We observed cell-specific gene expression changes following mTBI and unveiled diverse cell-to-cell interaction networks that influence a wide array of cellular processes. Moreover, we report novel neurogenesis lineage trajectories and related key transcription factors, which we validate through loss-of-function experiments. Specifically, we validate the role of

Indexed as

Brain Injuries, TraumaticNeural Stem CellsAnimalsCell DifferentiationMiceNeurogenesisNeuronsTranscriptome

Identifiers

PMID37730437
PMCPMC10691476
OpenAlexW4386884113

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.