Evidence map›Paper›PMID 37730068›Full record

ArticleThe Science of the total environment2023

Surveillance of SARS-CoV-2, rotavirus, norovirus genogroup II, and human adenovirus in wastewater as an epidemiological tool to anticipate outbreaks of COVID-19 and acute gastroenteritis in a city without a wastewater treatment plant in the Peruvian Highlands.

Cesar A Valdivia-Carrera, Ana C Ho-Palma, Astrid Munguia-Mercado, Karoll Gonzalez-Pizarro, Claudia Ibacache-Quiroga, Alejandro Dinamarca, Milan Stehlík, Marta Rusiñol, Rosina Girones, Maria T Lopez-Urbina and 2 more

Open access · greenAbstract read
In one paragraph

Article in The Science of the total environment, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 14 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 4 countries.

Cesar A Valdivia-CarreraTropical and Highlands Veterinary Research Institute, School of Veterinary Medicine, Universidad Nacional Mayor de San Marcos, Jr. 28 de Julio s/n, Km 34, margen izquierda, Carretera Central, El Mantaro, Jauja, Junin, Peru; Department of Animal Health and Public Health, School of Veterinary Medicine, Universidad Nacional Mayor de San Marcos, Av. Circunvalacion 2800, San Borja, Lima, Peru. Electronic address: cesar.valdivia@unmsm.edu.pe.
Ana C Ho-PalmaDepartment of Human Medicine, School of Human Medicine, Universidad Nacional del Centro del Peru, Av. Mariscal Castilla 3909, Huancayo, Peru. Electronic address: ahopalma@uncp.edu.pe.
Astrid Munguia-MercadoTropical and Highlands Veterinary Research Institute, School of Veterinary Medicine, Universidad Nacional Mayor de San Marcos, Jr. 28 de Julio s/n, Km 34, margen izquierda, Carretera Central, El Mantaro, Jauja, Junin, Peru. Electronic address: e_2014200530h@uncp.edu.pe.
Karoll Gonzalez-PizarroCentro de Micro-Bioinnovación, Universidad de Valparaíso, Av. Gran Bretaña 1093, Valparaíso, Chile. Electronic address: karoll.gonzalez@uv.cl.
Claudia Ibacache-QuirogaCentro de Micro-Bioinnovación, Universidad de Valparaíso, Av. Gran Bretaña 1093, Valparaíso, Chile; Escuela de Nutrición y Dietética, Facultad de Farmacia, Universidad de Valparaíso, Av. Gran Bretaña 1093, Valparaíso, Chile. Electronic address: claudia.ibacache@uv.cl.
Alejandro DinamarcaCentro de Micro-Bioinnovación, Universidad de Valparaíso, Av. Gran Bretaña 1093, Valparaíso, Chile; Escuela de Nutrición y Dietética, Facultad de Farmacia, Universidad de Valparaíso, Av. Gran Bretaña 1093, Valparaíso, Chile. Electronic address: alejandro.dinamarca@uv.cl.
Milan StehlíkInstitute of Statistics, Universidad de Valparaiso, Av. Gran Bretana 1111, Valparaiso, Chile; Linz Institute of Technology & Department of Applied Statistics, Johannes Kepler University in Linz, Altenberger Straße 69, 4040 Linz, Austria. Electronic address: milan.stehlik@uv.cl.
Marta RusiñolLaboratory of Virus Contaminants of Water and Food, Departament de Genètica, Microbiologia i Estadística, Facultat de Biologia, Universitat de Barcelona, Avinguda Diagonal 643, 08028 Barcelona, Catalonia, Spain. Electronic address: mrusinol@ub.edu.
Rosina GironesLaboratory of Virus Contaminants of Water and Food, Departament de Genètica, Microbiologia i Estadística, Facultat de Biologia, Universitat de Barcelona, Avinguda Diagonal 643, 08028 Barcelona, Catalonia, Spain. Electronic address: rgirones@ub.edu.
Maria T Lopez-UrbinaLaboratory of Veterinary Epidemiology and Economics, School of Veterinary Medicine, Universidad Nacional Mayor de San Marcos, Av. Circunvalacion 2800, San Borja, Lima, Peru. Electronic address: mlopezu@unmsm.edu.pe.
Anani Basaldua GalarzaDepartment of Human Medicine, School of Human Medicine, Universidad Nacional del Centro del Peru, Av. Mariscal Castilla 3909, Huancayo, Peru; Dirección Ejecutiva de Epidemiología, Dirección Regional de Salud, Jr. Julio Cesar Tello 488, Huancayo 12004, Junin, Peru. Electronic address: abasaldua@uncp.edu.pe.
Eloy Gonzales-GustavsonTropical and Highlands Veterinary Research Institute, School of Veterinary Medicine, Universidad Nacional Mayor de San Marcos, Jr. 28 de Julio s/n, Km 34, margen izquierda, Carretera Central, El Mantaro, Jauja, Junin, Peru; Department of Animal Health and Public Health, School of Veterinary Medicine, Universidad Nacional Mayor de San Marcos, Av. Circunvalacion 2800, San Borja, Lima, Peru. Electronic address: egonzalesg@unmsm.edu.pe.
National University of San Marcos · PEUniversity of Valparaíso · CLUniversitat de Barcelona · ESDirección Regional de Salud del Callao · PEJohannes Kepler University of Linz · ATUniversidad Nacional del Centro del Perú · PE

Funding

Training in Parasitic Diseases and Central Nervous System Infections in Peru.D43TW001140 · FIC · UNIVERSIDAD PERUANA CAYETANO HEREDIA · PI GARCIA, HECTOR HUGO, GILMAN, ROBERT H · 1999 to 2025
$5.7M
FIC NIH HHS D43 TW001140
6 · The paper itself

Abstract

The coronavirus disease 2019 (COVID-19) pandemic has demonstrated that Wastewater Based Epidemiology is a fast and economical alternative for monitoring severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) at the community level in high-income countries. In the present study, wastewater from a city in the Peruvian Highlands, which lacks a wastewater treatment plant, was monitored for one year to assess the relationship between the concentration of SARS-CoV-2 and the reported cases of COVID-19 in the community. Additionally, we compared the relationship between rotavirus (RV), norovirus genogroup II (NoV GGII), and human adenovirus (HAdV) with the number of reported cases of acute gastroenteritis. Before commencing the analysis of the samples, the viral recovery efficacy of three processing methods was determined in spiked wastewater with SARS-CoV-2. This evaluation demonstrated the highest recovery rate with direct analysis (72.2 %), as compared to ultrafiltration (50.8 %) and skimmed milk flocculation (5.6 %). Wastewater monitoring revealed that 72 % (36/50) of the samples tested positive for SARS-CoV-2, with direct analysis yielding the highest detection frequency and quantification of SARS-CoV-2. Furthermore, a strong correlation was observed between the concentration of SARS-CoV-2 in wastewater and the reported cases of COVID-19, mainly when we shift the concentration of SARS-CoV-2 by two weeks, which allows us to anticipate the onset of the fourth and fifth waves of the pandemic in Peru up to two weeks in advance. All samples processed using the skimmed milk flocculation method tested positive and showed high concentrations of RV, NoV GGII, and HAdV. In fact, the highest RV concentrations were detected up to four weeks before outbreaks of acute gastroenteritis reported in children under four years of age. In conclusion, the results of this study suggest that periodic wastewater monitoring is an excellent epidemiological tool for surveillance and can anticipate outbreaks of infectious diseases, such as COVID-19, in low- and middle-income countries.

Indexed as

Adenoviruses, HumanCOVID-19GastroenteritisNorovirusRotavirusChildChild, PreschoolDisease OutbreaksGenotypeHumansPeruSARS-CoV-2WastewaterWastewaterDirect analysisPeruvian highlandsRotavirusSARS-CoV-2Skimmed milk flocculationWastewater based epidemiology

Identifiers

PMID37730068
PMCPMC12370444
OpenAlexW4386836924

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.