Evidence map›Paper›PMID 37728561›Full record

ArticleJournal of experimental botany2024

Methyl viologen-induced changes in the Arabidopsis proteome implicate PATELLIN 4 in oxidative stress responses.

Pavol Melicher, Petr Dvořák, Jan Řehák, Olga Šamajová, Tibor Pechan, Jozef Šamaj, Tomáš Takáč

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Review
  3. Genome-wide analysis of the soybeanFrontiers in plant science · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Pavol MelicherDepartment of Biotechnology, Faculty of Science, Palacký University Olomouc, Olomouc, Czech Republic.ORCID 0000-0003-0576-8855
Petr DvořákDepartment of Biotechnology, Faculty of Science, Palacký University Olomouc, Olomouc, Czech Republic.ORCID 0000-0002-2926-7855
Jan ŘehákDepartment of Biotechnology, Faculty of Science, Palacký University Olomouc, Olomouc, Czech Republic.
Olga ŠamajováDepartment of Biotechnology, Faculty of Science, Palacký University Olomouc, Olomouc, Czech Republic.ORCID 0000-0001-6121-7164
Tibor PechanInstitute for Genomics, Biocomputing and Biotechnology, Mississippi Agricultural and Forestry Experiment Station, Mississippi State University, Starkville, MS, USA.ORCID 0000-0003-2224-7832
Jozef ŠamajDepartment of Biotechnology, Faculty of Science, Palacký University Olomouc, Olomouc, Czech Republic.ORCID 0000-0003-4750-2123
Tomáš TakáčDepartment of Biotechnology, Faculty of Science, Palacký University Olomouc, Olomouc, Czech Republic.ORCID 0000-0002-1569-1305
Palacký University Olomouc · CZMississippi State University · US

Funding

Training and Mentoring Core P20GM103476 · NIGMS · UNIVERSITY OF SOUTHERN MISSISSIPPI · PI MICHAEL R GARRETT · 2012 to 2026
$60.2M
Validation of the Regulatory Potential of Tailed MirtronsR15GM120716 · NIGMS · UNIVERSITY OF SOUTHERN MISSISSIPPI · PI FLYNT, ALEX · 2016 to 2016
$437k
NIGMS NIH HHS P20 GM103476NIGMS NIH HHS P20GM103476NIGMS NIH HHS R15 GM120716NIH HHS P20GM103476
6 · The paper itself

Abstract

The photosynthesis-induced accumulation of reactive oxygen species in chloroplasts can lead to oxidative stress, triggering changes in protein synthesis, degradation, and the assembly/disassembly of protein complexes. Using shot-gun proteomics, we identified methyl viologen-induced changes in protein abundance in wild-type Arabidopsis and oxidative stress-hypersensitive fsd1-1 and fsd1-2 knockout mutants, which are deficient in IRON SUPEROXIDE DISMUTASE 1 (FSD1). The levels of proteins that are localized in chloroplasts and the cytoplasm were modified in all lines treated with methyl viologen. Compared with the wild-type, fsd1 mutants showed significant changes in metabolic protein and chloroplast chaperone levels, together with increased ratio of cytoplasmic, peroxisomal, and mitochondrial proteins. Different responses in proteins involved in the disassembly of photosystem II-light harvesting chlorophyll a/b binding proteins were observed. Moreover, the abundance of PATELLIN 4, a phospholipid-binding protein enriched in stomatal lineage, was decreased in response to methyl viologen. Reverse genetic studies using patl4 knockout mutants and a PATELLIN 4 complemented line indicate that PATELLIN 4 affects plant responses to oxidative stress by effects on stomatal closure.

Indexed as

ArabidopsisArabidopsis ProteinsChlorophyll AChloroplastsOxidative StressParaquatPhotosynthesisProteomeArabidopsis ProteinsChlorophyll AParaquatProteomeArabidopsischloroplastIRON SUPEROXIDE DISMUTASE 1methyl viologenoxidative stressPATELLIN 4photosynthesisplasma membraneproteomics

Identifiers

PMID37728561
PMCPMC10735431
OpenAlexW4386878161

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.