Evidence map›Paper›PMID 37726703›Full record

ArticleBMC plant biology2023

Highly sex specific gene expression in Jojoba.

Bader Alsubaie, Ardashir Kharabian-Masouleh, Agnelo Furtado, Othman Al-Dossary, Ibrahim Al-Mssallem, Robert J Henry

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Bader AlsubaieQueensland Alliance for Agriculture and Food Innovation, University of Queensland, Brisbane, 4072, Australia.
Ardashir Kharabian-MasoulehQueensland Alliance for Agriculture and Food Innovation, University of Queensland, Brisbane, 4072, Australia.
Agnelo FurtadoQueensland Alliance for Agriculture and Food Innovation, University of Queensland, Brisbane, 4072, Australia.
Othman Al-DossaryQueensland Alliance for Agriculture and Food Innovation, University of Queensland, Brisbane, 4072, Australia.
Ibrahim Al-MssallemCollege of Agriculture and Food Sciences, King Faisal University, 36362, Al Hofuf, Saudi Arabia.
Robert J HenryQueensland Alliance for Agriculture and Food Innovation, University of Queensland, Brisbane, 4072, Australia. robert.henry@uq.edu.au.ORCID http://orcid.org/0000-0002-4060-0292
The University of Queensland · AUKing Faisal University · SA

Funding

King Faisal University KFU-14400005199
6 · The paper itself

Abstract

backgroundDioecious plants have male and female flowers on separate plants. Jojoba is a dioecious plant that is drought-tolerant and native to arid areas. The genome sequence of male and female plants was recently reported and revealed an X and Y chromosome system, with two large male-specific insertions in the Y chromosome.

resultsA total of 16,923 differentially expressed genes (DEG) were identified between the flowers of the male and female jojoba plants. This represented 40% of the annotated genes in the genome. Many genes, including those responsible for plant environmental responses and those encoding transcription factors (TFs), were specific to male or female reproductive organs. Genes involved in plant hormone metabolism were also found to be associated with flower and pollen development. A total of 8938 up-regulated and 7985 down-regulated genes were identified in comparison between male and female flowers, including many novel genes specific to the jojoba plant. The most differentially expressed genes were associated with reproductive organ development. The highest number of DEG were linked with the Y chromosome in male plants. The male specific parts of the Y chromosome encoded 12 very highly expressed genes including 9 novel genes and 3 known genes associated with TFs and a plant hormone which may play an important role in flower development.

conclusionMany genes, largely with unknown functions, may explain the sexual dimorphisms in jojoba plants and the differentiation of male and female flowers.

Indexed as

CaryophyllalesPlant Growth RegulatorsAnimalsDroughtsFlowersGene ExpressionPlant Growth RegulatorsChromosomesDifferentially expressed genesDioecious plantsFlowerJojobaNovel genesRNA-SeqSimmondsia chinensis

Identifiers

PMID37726703
PMCPMC10507870
OpenAlexW4386862104

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.