Evidence map›Paper›PMID 37725850›Full record

ArticleComputers in biology and medicine2023

EAGMN: Coronary artery semantic labeling using edge attention graph matching network.

Chen Zhao, Zhihui Xu, Guang-Uei Hung, Weihua Zhou

Open access · greenAbstract read
In one paragraph

Article in Computers in biology and medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 3 countries.

Chen ZhaoDepartment of Applied Computing, Michigan Technological University, Houghton, MI, USA.
Zhihui XuDepartment of Cardiology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Guang-Uei HungDepartment of Nuclear Medicine, Chang Bing Show Chwan Memorial Hospital, Changhua, Taiwan.
Weihua ZhouDepartment of Applied Computing, Michigan Technological University, Houghton, MI, USA; Center for Biocomputing and Digital Health, Institute of Computing and Cyber-systems, and Health Research Institute, Michigan Technological University, Houghton, MI, USA. Electronic address: whzhou@mtu.edu.
Michigan Technological University · USChang Bing Show Chwan Memorial Hospital · TWJiangsu Province Hospital · CN

Funding

Tulane COBRE in Cardiometabolic Diseases Clinical Research CoreP20GM109036 · NIGMS · TULANE UNIVERSITY OF LOUISIANA · PI Ning Liu · 2016 to 2026
$25.3M
Trans-omics Integration of Multi-omics Studies for OsteoporosisU19AG055373 · NIA · TULANE UNIVERSITY OF LOUISIANA · PI Qi Zhao · 2017 to 2026
$24.3M
Intensive Lifestyle Intervention, Metabolomics, and Risk of Frailty Fracture in Overweight or Obese Patients with Type 2 DiabetesR01AG068232 · NIA · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI JOHNSON, KAREN C, ZHAO, QI · 2021 to 2025
$3.1M
Identification of Metabolomic Profiles for Sarcopenia Traits in Older Whites and BlacksR01AG061917 · NIA · UNIVERSITY OF TENNESSEE HEALTH SCI CTR · PI SHEN, HUI, ZHAO, QI · 2019 to 2023
$3.0M
NIA NIH HHS R01 AG061917NIA NIH HHS R01 AG068232NIA NIH HHS U19 AG055373NIGMS NIH HHS P20 GM109036
6 · The paper itself

Abstract

Coronary artery disease (CAD) is one of the primary causes leading deaths worldwide. The presence of atherosclerotic lesions in coronary arteries is the underlying pathophysiological basis of CAD, and accurate extraction of individual arterial branches using invasive coronary angiography (ICA) is crucial for stenosis detection and CAD diagnosis. However, deep-learning-based models face challenges in generating semantic segmentation for coronary arteries due to the morphological similarity among different types of arteries. To address this challenge, we propose an innovative approach called the Edge Attention Graph Matching Network (EAGMN) for coronary artery semantic labeling. Inspired by the learning process of interventional cardiologists in interpreting ICA images, our model compares arterial branches between two individual graphs generated from different ICAs. We begin with extracting individual graphs based on the vascular tree obtained from the ICA. Each node in the individual graph represents an arterial segment, and the EAGMN aims to learn the similarity between nodes from the two individual graphs. By converting the coronary artery semantic segmentation task into a graph node similarity comparison task, identifying the node-to-node correspondence would assign semantic labels for each arterial branch. More specifically, the EAGMN utilizes the association graph constructed from the two individual graphs as input. A graph attention module is employed for feature embedding and aggregation, while a decoder generates the linear assignment for node-to-node semantic mapping. Based on the learned node-to-node relationships, unlabeled coronary arterial segments are classified using the labeled coronary arterial segments, thereby achieving semantic labeling. A dataset with 263 labeled ICAs is used to train and validate the EAGMN. Experimental results indicate the EAGMN achieved a weighted accuracy of 0.8653, a weighted precision of 0.8656, a weighted recall of 0.8653 and a weighted F1-score of 0.8643. Furthermore, we employ ZORRO to provide interpretability and explainability of the graph matching for artery semantic labeling. These findings highlight the potential of the EAGMN for accurate and efficient coronary artery semantic labeling using ICAs. By leveraging the inherent characteristics of ICAs and incorporating graph matching techniques, our proposed model provides a promising solution for improving CAD diagnosis and treatment.

Indexed as

Coronary Artery DiseaseCoronary VesselsCoronary AngiographyDeep LearningHumansNeural Networks, ComputerSemanticsCoronary artery diseaseCoronary artery semantic labelingGraph attentionGraph matchingInvasive coronary angiography

Identifiers

PMID37725850
PMCPMC11073582
OpenAlexW4386574049

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.