Evidence map›Paper›PMID 37725138›Full record

ArticleThe Journal of experimental medicine2023

Essential role of the Pax5 C-terminal domain in controlling B cell commitment and development.

Sarah Gruenbacher, Markus Jaritz, Louisa Hill, Markus Schäfer, Meinrad Busslinger

Abstract read
In one paragraph

Article in The Journal of experimental medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
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  3. Article
  4. Article
  5. Article
  6. Article
  7. Cancers · 2024
    Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Sarah GruenbacherResearch Institute of Molecular Pathology, Vienna BioCenter , Vienna, Austria.ORCID 0000-0002-6691-0766
Markus JaritzResearch Institute of Molecular Pathology, Vienna BioCenter , Vienna, Austria.ORCID 0000-0002-9326-2047
Louisa HillResearch Institute of Molecular Pathology, Vienna BioCenter , Vienna, Austria.ORCID 0000-0002-6258-6161
Markus SchäferResearch Institute of Molecular Pathology, Vienna BioCenter , Vienna, Austria.ORCID 0009-0002-9829-685X
Meinrad BusslingerResearch Institute of Molecular Pathology, Vienna BioCenter , Vienna, Austria.ORCID 0000-0002-9111-9351

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The B cell regulator Pax5 consists of multiple domains whose function we analyzed in vivo by deletion in Pax5. While B lymphopoiesis was minimally affected in mice with homozygous deletion of the octapeptide or partial homeodomain, both sequences were required for optimal B cell development. Deletion of the C-terminal regulatory domain 1 (CRD1) interfered with B cell development, while elimination of CRD2 modestly affected B-lymphopoiesis. Deletion of CRD1 and CRD2 arrested B cell development at an uncommitted pro-B cell stage. Most Pax5-regulated genes required CRD1 or both CRD1 and CRD2 for their activation or repression as these domains induced or eliminated open chromatin at Pax5-activated or Pax5-repressed genes, respectively. Co-immunoprecipitation experiments demonstrated that the activating function of CRD1 is mediated through interaction with the chromatin-remodeling BAF, H3K4-methylating Set1A-COMPASS, and H4K16-acetylating NSL complexes, while its repressing function depends on recruitment of the Sin3-HDAC and MiDAC complexes. These data provide novel molecular insight into how different Pax5 domains regulate gene expression to promote B cell commitment and development.

Indexed as

B-LymphocytesPrecursor Cells, B-LymphoidAnimalsChromatinHomozygoteMicePAX5 Transcription FactorSequence DeletionChromatinPax5 protein, mousePAX5 Transcription Factor

Identifiers

PMID37725138
PMCPMC10509461

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.